المؤلفون: Chalabi, Smahane, Loonen, Linda, Boekhorst, Jos, Li, Houcheng, Fang, Lingzhao, Harrison, Peter W., Lakhal, Wassim, Lluch, Jerome, Sokolov, Alexey, Djebali, Sarah, Rau, Andrea, Giuffra, Elisabetta, Wells, Jerry

المساهمون: Horizon 2020 Framework Programme

المصدر: Genomics ; volume 117, issue 2, page 110995 ; ISSN 0888-7543

الاتاحة: https://doi.org/10.1016/j.ygeno.2025.110995
https://api.elsevier.com/content/article/PII:S0888754325000114?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S0888754325000114?httpAccept=text/plain

المؤلفون: Fredriksen, Simen, Neila-Ibáñez, Carlos, Hennig-Pauka, Isabel, Guan, Xiaonan, Dunkelberger, Jenelle, de Oliveira, Isabela Fernandes, Ferrando, Maria Laura, Correa-Fiz, Florencia, Aragon, Virginia, Boekhorst, Jos, van Baarlen, Peter, Wells, Jerry M.

المصدر: Microbial Genomics 10 (2024) 12 ; ISSN: 2057-5858

مصطلحات موضوعية: AMR, S. suis carriage, S. suis infection, Streptococcus suis, colonization resistance, tonsil microbiome

وصف الملف: application/pdf

Relation: https://edepot.wur.nl/684589

الاتاحة: https://research.wur.nl/en/publications/streptococcus-suis-infection-on-european-farms-is-associated-with-2
https://doi.org/10.1099/mgen.0.001334

المؤلفون: van der Els, Simon, Boekhorst, Jos, Bron, Peter A., Kleerebezem, Michiel

المصدر: BMC Genomics 25 (2024) ; ISSN: 1471-2164

مصطلحات موضوعية: Comparative genomics, ICE-cargo, Integrative conjugative element (ICE), Lactococcus lactis, Mobile genetic elements

وصف الملف: application/pdf

Relation: https://edepot.wur.nl/670613

الاتاحة: https://research.wur.nl/en/publications/the-lactococcal-ice-ome-encodes-a-repertoire-of-exchangeable-trai
https://doi.org/10.1186/s12864-024-10646-y

المؤلفون: van der Els, Simon, Sheombarsing, Reshtrie, van Kempen, Thijn, Wels, Michiel, Boekhorst, Jos, Bron, Peter A., Kleerebezem, Michiel

المصدر: BMC Genomics 25 (2024) 1 ; ISSN: 1471-2164

مصطلحات موضوعية: Comparative genomics, Integrative conjugative element (ICE), Lactococcus lactis, Mobile genetic elements

وصف الملف: application/pdf

Relation: https://edepot.wur.nl/655193

الاتاحة: https://research.wur.nl/en/publications/detection-and-classification-of-the-integrative-conjugative-eleme
https://doi.org/10.1186/s12864-024-10255-9

المؤلفون: Fuhren, Jori, Schwalbe, Markus, Boekhorst, Jos, Rösch, Christiane, Schols, Henk A., Kleerebezem, Michiel

المصدر: Gut Microbes 16 (2024) 1 ; ISSN: 1949-0976

مصطلحات موضوعية: Lactiplantibacillus plantarum, competition, galacto-oligosaccharides, intestinal persistence, inulin, prebiotics, probiotics

وصف الملف: application/pdf

Relation: https://edepot.wur.nl/658991

الاتاحة: https://research.wur.nl/en/publications/prebiotic-utilisation-provides-lactiplantibacillus-plantarum-a-co
https://doi.org/10.1080/19490976.2024.2338946

المؤلفون: Chalabi, Smahane, Loonen, Linda, Boekhorst, Jos, Li, Houcheng, Fang, Lingzhao, Harrison, Peter, W, Lakhal, Wassim, Lluch, Jerome, Sokolov, Alexey, Djebali, Sarah, Rau, Andrea, Giuffra, Elisabetta, Wells, Jerry

المساهمون: MICrobiologie de l'ALImentation au Service de la Santé (MICALIS), AgroParisTech-Université Paris-Saclay-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Wageningen University and Research Wageningen (WUR), Aarhus University Aarhus, European Bioinformatics Institute Hinxton (EMBL-EBI), EMBL Heidelberg, diagenode, Génome et Transcriptome - Plateforme Génomique (GeT-PlaGe), Plateforme Génome & Transcriptome (GET), Génopole Toulouse Midi-Pyrénées Auzeville (GENOTOUL), Université Toulouse III - Paul Sabatier (UT3), Université de Toulouse (UT)-Université de Toulouse (UT)-Ecole Nationale Vétérinaire de Toulouse (ENVT), Institut National Polytechnique (Toulouse) (Toulouse INP), Université de Toulouse (UT)-Université de Toulouse (UT)-Institut National Polytechnique (Toulouse) (Toulouse INP), Université de Toulouse (UT)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Université Toulouse III - Paul Sabatier (UT3), Université de Toulouse (UT)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Génopole Toulouse Midi-Pyrénées Auzeville (GENOTOUL), Université de Toulouse (UT)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Ingénierie Radioprotection Sûreté Démantèlement (IRSD), Centre National de la Recherche Scientifique (CNRS), Génétique Animale et Biologie Intégrative (GABI)

المصدر: https://hal.science/hal-04770329 ; 2024.

مصطلحات موضوعية: High fiber, nutrition, epigenetics, SCFA, liver, muscle, deconvolution, [SDV]Life Sciences [q-bio]

الاتاحة: https://hal.science/hal-04770329
https://hal.science/hal-04770329v1/document
https://hal.science/hal-04770329v1/file/2024.08.13.607725v1.full.pdf
https://doi.org/10.1101/2024.08.13.607725

المؤلفون: Tedjo, Danyta I., Wilbrink, Jennifer A., Boekhorst, Jos, Timmerman, Harro M., Nienhuijs, Simon W., Stronkhorst, Arnold, Savelkoul, Paul H. M., Masclee, Ad A. M., Penders, John, Jonkers, Daisy M. A. E.

المصدر: Tedjo , D I , Wilbrink , J A , Boekhorst , J , Timmerman , H M , Nienhuijs , S W , Stronkhorst , A , Savelkoul , P H M , Masclee , A A M , Penders , J & Jonkers , D M A E 2023 , ' Impact of Sleeve Gastrectomy on Fecal Microbiota in Individuals with Morbid Obesity ' , Microorganisms , vol. 11 , no. 9 , 2353 . https://doi.org/10.3390/microorganisms11092353

مصطلحات موضوعية: gut microbiota in obesity, sleeve gastrectomy, intestinal permeability, HUMAN GUT MICROBIOTA, INTESTINAL MICROBIOTA, BARIATRIC SURGERY, PERMEABILITY, INFLAMMATION, DIET, ASSOCIATIONS, ABSORPTION, DISEASE, TRANSIT

الاتاحة: https://cris.maastrichtuniversity.nl/en/publications/6fb7449e-91eb-42b4-b7ed-a5ddab7379c5
https://doi.org/10.3390/microorganisms11092353

المؤلفون: Yeak, Kah Yen Claire, Boekhorst, Jos, Wels, Michiel, Abee, Tjakko, Wells-Bennik, Marjon H.J.

المصدر: BMC Microbiology 23 (2023) ; ISSN: 1471-2180

مصطلحات موضوعية: General stress response, Listeria monocytogenes, RsbKY, RsbQP, RsbRST, SigB consensus, SigB promoter binding motif, Staphylococcus aureus

وصف الملف: application/pdf

Relation: https://edepot.wur.nl/586849

الاتاحة: https://research.wur.nl/en/publications/prediction-and-validation-of-novel-sigb-regulon-members-in-bacill
https://doi.org/10.1186/s12866-022-02700-0

المؤلفون: Zaccaria, Edoardo, Klaassen, Tim, Alleleyn, Annick M.E., Boekhorst, Jos, Smokvina, Tamara, Kleerebezem, Michiel, Troost, Freddy J.

المصدر: Microbiome 11 (2023) 1 ; ISSN: 2049-2618

مصطلحات موضوعية: Fermented products, Human trial, Personalised microbiome, Small intestine

وصف الملف: application/pdf

Relation: https://edepot.wur.nl/590595

الاتاحة: https://research.wur.nl/en/publications/endogenous-small-intestinal-microbiome-determinants-of-transient-
https://doi.org/10.1186/s40168-023-01491-4

المؤلفون: López Nadal, Adrià, Boekhorst, Jos, Lute, Carolien, van den Berg, Frank, Schorn, Michelle A., Bergen Eriksen, Tommy, Peggs, David, McGurk, Charles, Sipkema, Detmer, Kleerebezem, Michiel, Wiegertjes, Geert F., Brugman, Sylvia

المصدر: Animal Microbiome 5 (2023) 1 ; ISSN: 2524-4671

مصطلحات موضوعية: Butyrate, Gut, Imaging, Inflammation, Microbiome, Omics, Soy saponin, Transcriptome, Zebrafish

وصف الملف: application/pdf

Relation: https://edepot.wur.nl/632562

الاتاحة: https://research.wur.nl/en/publications/omics-and-imaging-combinatorial-approach-reveals-butyrate-induced
https://doi.org/10.1186/s42523-023-00230-2

المؤلفون: Fredriksen, Simen, Ruijten, Suzanne D.E., Murray, Gemma G.R., Juanpere-Borràs, Maria, van Baarlen, Peter, Boekhorst, Jos, Wells, Jerry M.

المصدر: Microbial Genomics 9 (2023) 4 ; ISSN: 2057-5858

مصطلحات موضوعية: Life Science

وصف الملف: application/pdf

Relation: https://edepot.wur.nl/633194

الاتاحة: https://research.wur.nl/en/publications/transcriptomics-in-serum-and-culture-medium-reveal-shared-and-dif
https://doi.org/10.1099/mgen.0.000992

المؤلفون: Nadal, Adrià López, Kidess, Evelien, Boekhorst, Jos, Wiegertjes, Geert, Brugman, Sylvia

المصدر: Water Biology and Security 2 (2023) 3 ; ISSN: 2772-7351

مصطلحات موضوعية: Immunity, Microbiota, Oxytetracycline, Saponin, Zebrafish

وصف الملف: application/pdf

Relation: https://edepot.wur.nl/635181

الاتاحة: https://research.wur.nl/en/publications/environmental-microbes-determine-macrophage-response-towards-sapo
https://doi.org/10.1016/j.watbs.2023.100187

المؤلفون: Huang, Zhan, Boekhorst, Jos, Fogliano, Vincenzo, Capuano, Edoardo, Wells, Jerry M.

المصدر: Journal of Agricultural and Food Chemistry 71 (2023) 18 ; ISSN: 0021-8561

مصطلحات موضوعية: SHIME, diet, gut microbiota, indole derivatives, tryptophan

وصف الملف: application/pdf

Relation: https://edepot.wur.nl/635559

الاتاحة: https://research.wur.nl/en/publications/impact-of-high-fiber-or-high-protein-diet-on-the-capacity-of-huma
https://doi.org/10.1021/acs.jafc.2c08953

المؤلفون: Fredriksen, Simen, de Warle, Stef, van Baarlen, Peter, Boekhorst, Jos, Wells, Jerry M.

المصدر: Microbiome 11 (2023) 1 ; ISSN: 2049-2618

مصطلحات موضوعية: Life Science

وصف الملف: application/pdf

Relation: https://edepot.wur.nl/636599

الاتاحة: https://research.wur.nl/en/publications/resistome-expansion-in-disease-associated-human-gut-microbiomes
https://doi.org/10.1186/s40168-023-01610-1

المؤلفون: Zaccaria, Edoardo, Klaassen, Tim, Alleleyn, Annick, Boekhorst, Jos, Chervaux, Christian, Smokvina, Tamara, Troost, Freddy, Kleerebezem, Michiel

المصدر: Gut Microbes 15 (2023) 1 ; ISSN: 1949-0976

مصطلحات موضوعية: Life Science

وصف الملف: application/pdf

Relation: https://edepot.wur.nl/637420

الاتاحة: https://research.wur.nl/en/publications/l-rhamnosus-cncm-i-3690-survival-adaptation-and-small-bowel-micro
https://doi.org/10.1080/19490976.2023.2244720

المؤلفون: Kortman, Guus A.M., Timmerman, Harro M., Schaafsma, Anne, Stoutjesdijk, Eline, Muskiet, Frits A.J., Nhien, Nguyen V., van Hoffen, Els, Boekhorst, Jos, Nauta, Arjen

المصدر: Kortman , G A M , Timmerman , H M , Schaafsma , A , Stoutjesdijk , E , Muskiet , F A J , Nhien , N V , van Hoffen , E , Boekhorst , J & Nauta , A 2023 , ' Mothers’ Breast Milk Composition and Their Respective Infant’s Gut Microbiota Differ between Five Distinct Rural and Urban Regions in Vietnam ' , Nutrients , vol. 15 , no. 22 , 4802 . https://doi.org/10.3390/nu15224802

مصطلحات موضوعية: breast milk, diet, infant, microbiota, nutrients, oligosaccharides

وصف الملف: application/pdf

الاتاحة: https://hdl.handle.net/11370/2e9d9856-ecd2-4650-9dba-8a72473dc1b9
https://research.rug.nl/en/publications/2e9d9856-ecd2-4650-9dba-8a72473dc1b9
https://doi.org/10.3390/nu15224802
https://pure.rug.nl/ws/files/910521016/nutrients-15-04802.pdf
http://www.scopus.com/inward/record.url?scp=85177799757&partnerID=8YFLogxK

المؤلفون: Huang, Zhan, Boekhorst, Jos, Fogliano, Vincenzo, Capuano, Edoardo, Wells, Jerry M.

المساهمون: China Scholarship Council

المصدر: Food Chemistry ; volume 398, page 133801 ; ISSN 0308-8146

الاتاحة: http://dx.doi.org/10.1016/j.foodchem.2022.133801
https://api.elsevier.com/content/article/PII:S0308814622017630?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S0308814622017630?httpAccept=text/plain

المؤلفون: Schoemaker, Marieke H., Hageman, Jeske H.J., Ten Haaf, Dominique, Hartog, Anita, Scholtens, Petra A.M.J., Boekhorst, Jos, Nauta, Arjen, Bos, Rolf

المصدر: Nutrients 14 (2022) 2 ; ISSN: 2072-6643

مصطلحات موضوعية: Constipation, Galacto-oligosaccharides, Microbiota, Stool characteristics, Stool consistency, Stool frequency

وصف الملف: application/pdf

Relation: https://edepot.wur.nl/563643

الاتاحة: https://research.wur.nl/en/publications/prebiotic-galacto-oligosaccharides-impact-stool-frequency-and-fec
https://doi.org/10.3390/nu14020309

المؤلفون: Fredriksen, Simen, Guan, Xiaonan, Boekhorst, Jos, Molist, Francesc, van Baarlen, Peter, Wells, Jerry M.

المصدر: BMC Microbiology 22 (2022) 1 ; ISSN: 1471-2180

مصطلحات موضوعية: early life, longitudinal, microbiota, piglet, sow

وصف الملف: application/pdf

Relation: https://edepot.wur.nl/578424

الاتاحة: https://research.wur.nl/en/publications/environmental-and-maternal-factors-shaping-tonsillar-microbiota-d
https://doi.org/10.1186/s12866-022-02625-8

المؤلفون: Boekhorst, Jos, Venlet, Naomi, Procházková, Nicola, Hansen, Mathias L., Lieberoth, Christian B., Bahl, Martin I., Lauritzen, Lotte, Pedersen, Oluf, Licht, Tine Rask, Kleerebezem, Michiel, Roager, Henrik M.

المصدر: Microbiome 10 (2022) 1 ; ISSN: 2049-2618

مصطلحات موضوعية: Energy harvest, Intestinal transit time, Microbial ecology, Personalised nutrition

وصف الملف: application/pdf

Relation: https://edepot.wur.nl/583689

الاتاحة: https://research.wur.nl/en/publications/stool-energy-density-is-positively-correlated-to-intestinal-trans
https://doi.org/10.1186/s40168-022-01418-5