المؤلفون: Fradkin, Philip, Azadi, Puria, Suri, Karush, Wenkel, Frederik, Bashashati, Ali, Sypetkowski, Maciej, Beaini, Dominique

مصطلحات موضوعية: Quantitative Biology - Quantitative Methods, Computer Science - Machine Learning

URL الوصول: http://arxiv.org/abs/2409.08302

المؤلفون: Mallya, Mayur, Mirabadi, Ali Khajegili, Farahani, Hossein, Bashashati, Ali

مصطلحات موضوعية: Electrical Engineering and Systems Science - Image and Video Processing, Computer Science - Computer Vision and Pattern Recognition, Computer Science - Machine Learning

URL الوصول: http://arxiv.org/abs/2407.20596

المؤلفون: Mirabadi, Ali Khajegili, Archibald, Graham, Darbandsari, Amirali, Contreras-Sanz, Alberto, Nakhli, Ramin Ebrahim, Asadi, Maryam, Zhang, Allen, Gilks, C. Blake, Black, Peter, Wang, Gang, Farahani, Hossein, Bashashati, Ali

مصطلحات موضوعية: Computer Science - Computer Vision and Pattern Recognition

URL الوصول: http://arxiv.org/abs/2402.03592

المؤلفون: Nakhli, Ramin, Zhang, Allen, Farahani, Hossein, Darbandsari, Amirali, Shenasa, Elahe, Thiessen, Sidney, Milne, Katy, McAlpine, Jessica, Nelson, Brad, Gilks, C Blake, Bashashati, Ali

مصطلحات موضوعية: Electrical Engineering and Systems Science - Image and Video Processing, Computer Science - Computer Vision and Pattern Recognition, Computer Science - Machine Learning, Quantitative Biology - Quantitative Methods

URL الوصول: http://arxiv.org/abs/2303.04696

المؤلفون: Nakhli, Ramin, Moghadam, Puria Azadi, Mi, Haoyang, Farahani, Hossein, Baras, Alexander, Gilks, Blake, Bashashati, Ali

مصطلحات موضوعية: Computer Science - Computer Vision and Pattern Recognition

URL الوصول: http://arxiv.org/abs/2303.00865

المؤلفون: Bazargani, Roozbeh, Fazli, Ladan, Goldenberg, Larry, Gleave, Martin, Bashashati, Ali, Salcudean, Septimiu

مصطلحات موضوعية: Computer Science - Computer Vision and Pattern Recognition

URL الوصول: http://arxiv.org/abs/2212.08781

المؤلفون: Moghadam, Puria Azadi, Van Dalen, Sanne, Martin, Karina C., Lennerz, Jochen, Yip, Stephen, Farahani, Hossein, Bashashati, Ali

مصطلحات موضوعية: Electrical Engineering and Systems Science - Image and Video Processing, Computer Science - Computer Vision and Pattern Recognition

URL الوصول: http://arxiv.org/abs/2209.13167

المؤلفون: Nakhli, Ramin, Darbandsari, Amirali, Farahani, Hossein, Bashashati, Ali

مصطلحات موضوعية: Computer Science - Computer Vision and Pattern Recognition

URL الوصول: http://arxiv.org/abs/2208.06445

المؤلفون: Wang, Yiping, Farnell, David, Farahani, Hossein, Nursey, Mitchell, Tessier-Cloutier, Basile, Jones, Steven J. M., Huntsman, David G., Gilks, C. Blake, Bashashati, Ali

مصطلحات موضوعية: Electrical Engineering and Systems Science - Image and Video Processing, Computer Science - Computer Vision and Pattern Recognition

URL الوصول: http://arxiv.org/abs/2005.10957

المؤلفون: Nakhli, Ramin, Rich, Katherine, Zhang, Allen, Darbandsari, Amirali, Shenasa, Elahe, Hadjifaradji, Amir, Thiessen, Sidney, Milne, Katy, Jones, Steven J. M., McAlpine, Jessica N., Nelson, Brad H., Gilks, C. Blake, Farahani, Hossein, Bashashati, Ali

المساهمون: Gouvernement du Canada | Natural Sciences and Engineering Research Council of Canada, Gouvernement du Canada | Canadian Institutes of Health Research, Michael Smith Foundation for Health Research, Terry Fox Research Institute

المصدر: Nature Communications ; volume 15, issue 1 ; ISSN 2041-1723

الاتاحة: http://dx.doi.org/10.1038/s41467-024-48062-1
https://www.nature.com/articles/s41467-024-48062-1.pdf
https://www.nature.com/articles/s41467-024-48062-1

المؤلفون: Nakhli, Ramin, Moghadam, Puria Azadi, Mi, Haoyang, Farahani, Hossein, Baras, Alexander, Gilks, Blake, Bashashati, Ali

المساهمون: National Institutes of Health of United States

المصدر: 2023 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR) ; page 11547-11557

الاتاحة: https://doi.org/10.1109/cvpr52729.2023.01111
http://xplorestaging.ieee.org/ielx7/10203037/10203050/10203475.pdf?arnumber=10203475

المؤلفون: Shao, Yanan, Bazargani, Roozbeh, Karimi, Davood, Wang, Jane, Fazli, Ladan, Goldenberg, S. Larry, Gleave, Martin E., Black, Peter C., Bashashati, Ali, Salcudean, Septimiu

المصدر: JCO Clinical Cancer Informatics; 12/1/2024, Vol. 8, p1-9, 9p

مصطلحات موضوعية: CONVOLUTIONAL neural networks, DISEASE risk factors, RADICAL prostatectomy, PROSTATE cancer, MACHINE learning, DEEP learning

المؤلفون: Tarpey, Patrick S, Behjati, Sam, Young, Matthew D, Martincorena, Inigo, Alexandrov, Ludmil B, Farndon, Sarah J, Guzzo, Charlotte, Hardy, Claire, Latimer, Calli, Butler, Adam P, Teague, Jon W, Shlien, Adam, Futreal, P Andrew, Shah, Sohrab, Bashashati, Ali, Jamshidi, Farzad, Nielsen, Torsten O, Huntsman, David, Baumhoer, Daniel, Brandner, Sebastian, Wunder, Jay, Dickson, Brendan, Cogswell, Patricia, Sommer, Josh, Phillips, Joanna J, Amary, M Fernanda, Tirabosco, Roberto, Pillay, Nischalan, Yip, Stephen, Stratton, Michael R, Flanagan, Adrienne M, Campbell, Peter J

المصدر: Nature communications. 8(1)

مصطلحات موضوعية: Cell Line, Tumor, Humans, Chordoma, Bone Neoplasms, T-Box Domain Proteins, Fetal Proteins, Vesicular Transport Proteins, Case-Control Studies, Gene Duplication, Mutation, Polymorphism, Single Nucleotide, Phosphatidylinositol 3-Kinases, Class I Phosphatidylinositol 3-Kinases, Cell Line, Tumor, Polymorphism, Single Nucleotide

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/9fq592kc

المؤلفون: Taghiyar, M Jafar, Rosner, Jamie, Grewal, Diljot, Grande, Bruno M, Aniba, Radhouane, Grewal, Jasleen, Boutros, Paul C, Morin, Ryan D, Bashashati, Ali, Shah, Sohrab P

المصدر: GigaScience. 6(7)

مصطلحات موضوعية: High-Throughput Nucleotide Sequencing, Software, Whole Genome Sequencing, genomics, workflow, pipeline, reproducibility

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/6866g0s1
https://escholarship.org/content/qt6866g0s1/qt6866g0s1.pdf

المؤلفون: Ahmadvand, Pouya, Farahani, Hossein, Farnell, David, Darbandsari, Amirali, Topham, James, Karasinska, Joanna, Nelson, Jessica, Naso, Julia, Jones, Steven J.M., Renouf, Daniel, Schaeffer, David F., Bashashati, Ali

المصدر: American Journal of Pathology; December 2024, Vol. 194 Issue: 12 p2302-2312, 11p

المؤلفون: Bashashati, Ali

الاتاحة: http://hdl.handle.net/2429/31213

المؤلفون: Pilsworth, Jessica A., Cochrane, Dawn R., Neilson, Samantha J., Moussavi, Bahar H., Lai, Daniel, Munzur, Asli D., Senz, Janine, Wang, Yi Kan, Zareian, Sina, Bashashati, Ali, Wong, Adele, Keul, Jacqueline, Staebler, Annette, van Meurs, Hannah S., Horlings, Hugo M., Kommoss, Stefan, Kommoss, Friedrich, Oliva, Esther, Färkkilä, Anniina E. M., Gilks, Blake, Huntsman, David G.

المساهمون: Research Program in Systems Oncology, HUS Gynecology and Obstetrics, Clinicum, University of Helsinki

مصطلحات موضوعية: adult-type granulosa cell tumor of the ovary, FOXL2, TERT promoter, KMT2D, targeted sequencing, mutation profiling, cell cycle genes, sex cord-stromal tumor, ovarian cancer, TERM-FOLLOW-UP, CANCER, WNK2, KINASE, PATHOGENESIS, SUPPRESSOR, MUTATION, NLRC5, Biomedicine

وصف الملف: application/pdf

Relation: We thank all the women who generously donated the samples used in this study. This work is supported by the Terry Fox Research Institute New Frontiers Program Project Grant #1082, the Canadian Institutes of Health Research Foundation Grant #154290, the BC Cancer Foundation, and the Vancouver General Hospital (VGH) & University of British Columbia (UBC) Hospital Foundation (to OVCARE: BC's Ovarian Cancer Research Team, Vancouver). JAP is supported by the University of British Columbia Four-Year Doctoral Fellowship. DGH is supported by the Dr. Chew Wei Memorial Professorship in Gynecologic Oncology and the Canada Research Chairs Program (Research Chair in Molecular and Genomic Pathology). We are grateful to the clinicians from each institution for patient recruitment and the OVCARE Gynecologic Tissue bank for providing patient tissues. We also thank Drs. Blake Gilks, Friedrich Kommoss, Hugo M. Horlings, Ralf Butzow, Anthony N. Karnezis, Hector Li Chang, Basile Tessier-Cloutier, and Lien Hoang for expert pathology review. We are grateful to Winnie Yang and Amy Lum for their technical support.; Pilsworth , J A , Cochrane , D R , Neilson , S J , Moussavi , B H , Lai , D , Munzur , A D , Senz , J , Wang , Y K , Zareian , S , Bashashati , A , Wong , A , Keul , J , Staebler , A , van Meurs , H S , Horlings , H M , Kommoss , S , Kommoss , F , Oliva , E , Färkkilä , A E M , Gilks , B & Huntsman , D G 2021 , ' Adult-type granulosa cell tumor of the ovary : a FOXL2-centric disease ' , The Journal of Pathology. Clinical Research , vol. 7 , no. 3 , pp. 243-252 . https://doi.org/10.1002/cjp2.198; http://hdl.handle.net/10138/340002; 8a9428b9-598f-457c-891e-325cff525a84; 000606605900001

الاتاحة: http://hdl.handle.net/10138/340002

المؤلفون: Farahani, Hossein, Boschman, Jeffrey, Farnell, David, Darbandsari, Amirali, Zhang, Allen, Ahmadvand, Pouya, Jones, Steven J.M., Huntsman, David, Köbel, Martin, Gilks, C. Blake, Singh, Naveena, Bashashati, Ali

المساهمون: Gouvernement du Canada | Instituts de Recherche en Santé du Canada | CIHR Skin Research Training Centre, Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada, Michael Smith Foundation for Health Research, Cascadia Data Alliance, OVCARE Carraresi, UBC ObGyn funds

المصدر: Modern Pathology ; volume 35, issue 12, page 1983-1990 ; ISSN 0893-3952

الاتاحة: http://dx.doi.org/10.1038/s41379-022-01146-z
https://www.nature.com/articles/s41379-022-01146-z.pdf
https://www.nature.com/articles/s41379-022-01146-z
https://api.elsevier.com/content/article/PII:S0893395222055107?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S0893395222055107?httpAccept=text/plain

المؤلفون: Anglesio, Michael S, Bashashati, Ali, Wang, Yi Kan, Senz, Janine, Ha, Gavin, Yang, Winnie, Aniba, Mohamed R, Prentice, Leah M, Farahani, Hossein, Li Chang, Hector, Karnezis, Anthony N, Marra, Marco A, Yong, Paul J, Hirst, Martin, Gilks, Blake, Shah, Sohrab P, Huntsman, David G

المصدر: The Journal of Pathology. 236(2)

مصطلحات موضوعية: Biomedical and Clinical Sciences, Oncology and Carcinogenesis, Rare Diseases, Ovarian Cancer, Human Genome, Cancer, Genetics, Endometriosis, 2.1 Biological and endogenous factors, Aetiology, Adenocarcinoma, Clear Cell, Class I Phosphatidylinositol 3-Kinases, DNA, Neoplasm, DNA-Binding Proteins, Female, Genome-Wide Association Study, Humans, Mutation, Nuclear Proteins, Ovarian Neoplasms, Phosphatidylinositol 3-Kinases, Precancerous Conditions, Sequence Analysis, DNA, Transcription Factors, endometriosis, ovarian cancer, clear cell carcinoma, cancer precursor, sequencing, Clinical Sciences, Pathology, Clinical sciences, Oncology and carcinogenesis

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/9gf7w101

المؤلفون: Asadi-Aghbolaghi, Maryam, Darbandsari, Amirali, Zhang, Allen, Contreras-Sanz, Alberto, Boschman, Jeffrey, Ahmadvand, Pouya, Köbel, Martin, Farnell, David, Huntsman, David G., Churg, Andrew, Black, Peter C., Wang, Gang, Gilks, C. Blake, Farahani, Hossein, Bashashati, Ali

المصدر: NPJ Precision Oncology; 7/19/2024, Vol. 8 Issue 1, p1-18, 18p

مصطلحات موضوعية: IMAGE recognition (Computer vision), MACHINE learning, ARTIFICIAL intelligence, DEEP learning, CONVOLUTIONAL neural networks, OBJECT recognition (Computer vision)