المؤلفون: Roche, Kimberly E, Bjork, Johannes R, Dasari, Mauna R, Grieneisen, Laura, Jansen, David, Gould, Trevor J, Gesquiere, Laurence R, Barreiro, Luis B, Alberts, Susan C, Blekhman, Ran, Gilbert, Jack A, Tung, Jenny, Mukherjee, Sayan, Archie, Elizabeth A

مصطلحات موضوعية: Pediatric, Genetics, Aetiology, 2.2 Factors relating to the physical environment, Infection, Animals, Humans, Gastrointestinal Microbiome, Papio, Microbiota, Bacteria, RNA, Ribosomal, 16S, P. cynocephalus, correlations between bacteria, ecology, gut microbiota, infectious disease, longitudinal data analysis, microbiology, microbiome community dynamics, personalization, universality, Biochemistry and Cell Biology

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/5mf810jx
https://escholarship.org/content/qt5mf810jx/qt5mf810jx.pdf

المؤلفون: Klunk, Jennifer, Vilgalys, Tauras P, Demeure, Christian E, Cheng, Xiaoheng, Shiratori, Mari, Madej, Julien, Beau, Rémi, Elli, Derek, Patino, Maria I, Redfern, Rebecca, DeWitte, Sharon N, Gamble, Julia A, Boldsen, Jesper L, Carmichael, Ann, Varlik, Nükhet, Eaton, Katherine, Grenier, Jean-Christophe, Golding, G Brian, Devault, Alison, Rouillard, Jean-Marie, Yotova, Vania, Sindeaux, Renata, Ye, Chun Jimmie, Bikaran, Matin, Dumaine, Anne, Brinkworth, Jessica F, Missiakas, Dominique, Rouleau, Guy A, Steinrücken, Matthias, Pizarro-Cerdá, Javier, Poinar, Hendrik N, Barreiro, Luis B

المصدر: Nature. 611(7935)

مصطلحات موضوعية: Biological Sciences, Genetics, Emerging Infectious Diseases, Infectious Diseases, Prevention, Vector-Borne Diseases, Infection, Good Health and Well Being, Humans, Aminopeptidases, DNA, Ancient, Plague, Yersinia pestis, Selection, Genetic, Europe, Immunity, Datasets as Topic, Genetic Predisposition to Disease, London, Denmark, General Science & Technology

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/28c118cj

المؤلفون: Johnston, Rachel A, Aracena, Katherine A, Barreiro, Luis B, Lea, Amanda J, Tung, Jenny

المساهمون: National Institutes of Health, Canadian Institute for Advanced Research, Sloan Foundation, Foerster-Bernstein Postdoctoral Fellowship

المصدر: eLife ; volume 12 ; ISSN 2050-084X

الاتاحة: http://dx.doi.org/10.7554/elife.89371.3
https://cdn.elifesciences.org/articles/89371/elife-89371-v1.pdf
https://cdn.elifesciences.org/articles/89371/elife-89371-v1.xml
https://elifesciences.org/articles/89371

المؤلفون: Randolph, Haley E., Aracena, Katherine A., Lin, Yen‐Lung, Mu, Zepeng, Barreiro, Luis B.

المساهمون: National Institutes of Health, Howard Hughes Medical Institute

المصدر: Immunological Reviews ; volume 323, issue 1, page 227-240 ; ISSN 0105-2896 1600-065X

الاتاحة: http://dx.doi.org/10.1111/imr.13329
https://onlinelibrary.wiley.com/doi/pdf/10.1111/imr.13329

المؤلفون: Maure, Alexandra, Lawarée, Emeline, Fiorentino, Francesco, Pawlik, Alexandre, Gona, Saideep, Giraud-Gatineau, Alexandre, Eldridge, Matthew J. G., Danckaert, Anne, Hardy, David, Frigui, Wafa, Keck, Camille, Gutierrez, Claude, Neyrolles, Olivier, Aulner, Nathalie, Mai, Antonello, Hamon, Mélanie, Barreiro, Luis B., Brodin, Priscille, Brosch, Roland, Rotili, Dante, Tailleux, Ludovic

المساهمون: Pál, Csaba, Institut Pasteur, Georges, Jacques and Elias Canetti Award, Agence Nationale de la Recherche, Région Île-de-France, Fondation pour la Recherche Médicale, Sapienza Università di Roma, Regione Lazio, Ministero dell’Istruzione, dell’Università e della Ricerca

المصدر: PLOS Biology ; volume 22, issue 4, page e3002259 ; ISSN 1545-7885

الاتاحة: http://dx.doi.org/10.1371/journal.pbio.3002259
https://dx.plos.org/10.1371/journal.pbio.3002259

المؤلفون: Lougheed, David R, Liu, Hanshi, Aracena, Katherine A, Grégoire, Romain, Pacis, Alain, Pastinen, Tomi, Barreiro, Luis B, Joly, Yann, Bujold, David, Bourque, Guillaume

المساهمون: Alkan, Can, Canada Institute of Health Research, McGill Epigenomics, Canadian Epigenetics, Environment and Health Research Consortium, National Institute of Health

المصدر: Bioinformatics ; volume 40, issue 3 ; ISSN 1367-4811

الاتاحة: http://dx.doi.org/10.1093/bioinformatics/btae136
https://academic.oup.com/bioinformatics/advance-article-pdf/doi/10.1093/bioinformatics/btae136/56887331/btae136.pdf
https://academic.oup.com/bioinformatics/article-pdf/40/3/btae136/57087810/btae136.pdf

المؤلفون: Sarkar, Amar, McInroy, Cameron J.A., Harty, Siobhán, Raulo, Aura, Ibata, Neil G.O., Valles-Colomer, Mireia, Johnson, Katerina V.-A., Brito, Ilana L., Henrich, Joseph, Archie, Elizabeth A., Barreiro, Luis B., Gazzaniga, Francesca S., Finlay, B. Brett, Koonin, Eugene V., Carmody, Rachel N., Moeller, Andrew H.

المصدر: Cell ; volume 187, issue 1, page 17-43 ; ISSN 0092-8674

الاتاحة: http://dx.doi.org/10.1016/j.cell.2023.12.014
https://api.elsevier.com/content/article/PII:S0092867423013466?httpAccept=text/xml
https://api.elsevier.com/content/article/PII:S0092867423013466?httpAccept=text/plain

المؤلفون: Kim, Sangman M, DeFazio, Jennifer R, Hyoju, Sanjiv K, Sangani, Kishan, Keskey, Robert, Krezalek, Monika A, Khodarev, Nikolai N, Sangwan, Naseer, Christley, Scott, Harris, Katharine G, Malik, Ankit, Zaborin, Alexander, Bouziat, Romain, Ranoa, Diana R, Wiegerinck, Mara, Ernest, Jordan D, Shakhsheer, Baddr A, Fleming, Irma D, Weichselbaum, Ralph R, Antonopoulos, Dionysios A, Gilbert, Jack A, Barreiro, Luis B, Zaborina, Olga, Jabri, Bana, Alverdy, John C

المصدر: Nature Communications. 11(1)

مصطلحات موضوعية: Sepsis, Transplantation, Hematology, Infectious Diseases, Emerging Infectious Diseases, 5.1 Pharmaceuticals, Development of treatments and therapeutic interventions, Infection, Inflammatory and immune system, Good Health and Well Being, Animals, Butyric Acid, Fecal Microbiota Transplantation, Feces, Gastrointestinal Microbiome, Gastrointestinal Tract, Histone Deacetylase Inhibitors, Humans, Immunity, Interferon Regulatory Factor-3, Male, Mice, Inbred C57BL, Signal Transduction, Transcription, Genetic

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/01g2b8x4
https://escholarship.org/content/qt01g2b8x4/qt01g2b8x4.pdf

المؤلفون: Breton, Gwenna, Sjödin, Per, Zervakis, Panagiotis, I, Laurent, Romain, Froment, Alain, Sjöstrand, Agnès, E, Hewlett, Barry, S, Barreiro, Luis, B, Perry, George, H, Soodyall, Himla, Heyer, Evelyne, Schlebusch, Carina, M, Jakobsson, Mattias, Verdu, Paul

المساهمون: Uppsala Universitet Uppsala, Sahlgrenska University Hospital Gothenburg, Éco-Anthropologie (EA), Muséum national d'Histoire naturelle (MNHN)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité), Patrimoines locaux, Environnement et Globalisation (PALOC), Muséum national d'Histoire naturelle (MNHN)-Institut de Recherche pour le Développement (IRD)-Centre National de la Recherche Scientifique (CNRS), Washington State University (WSU), The University of Chicago Medicine Chicago, Department of Biology and Huck Institutes of the Life Sciences, Pennsylvania State University, University Park, PA, Department of Anthropology, The Pennsylvania State University, University of the Witwatersrand Johannesburg (WITS), Academy of Science of South Africa, Uppsala University, Palaeo-Research Institute, University of Johannesburg, IMBIM/NBIS/SciLifeLab

المصدر: https://hal.science/hal-04798019 ; 2024.

مصطلحات موضوعية: Tree topologies, Africa, Demographic history, Admixture analysis, Ancient migrations, Approximate Bayesian Computations, Whole Genome Sequences, Khoe and San populations Data Curation, Human genetic lineages, Genome diversity, [SDV.BDD]Life Sciences [q-bio]/Development Biology, [SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]

Relation: BIORXIV: 2024.07.15.603519

الاتاحة: https://hal.science/hal-04798019
https://hal.science/hal-04798019v1/document
https://hal.science/hal-04798019v1/file/BIORXIV-2024-603519v1-Verdu.pdf

المؤلفون: Vilgalys, Tauras, P, Klunk, Jennifer, Demeure, Christian, E, Cheng, Xiaoheng, Shiratori, Mari, Madej, Julien, Beau, Rémi, Elli, Derek, Patino, Maria, I, Redfern, Rebecca, Dewitte, Sharon, N, Gamble, Julia, A, Boldsen, Jesper, L, Carmichael, Ann, Varlik, Nükhet, Eaton, Katherine, Grenier, Jean-Christophe, Golding, G. Brian, Devault, Alison, Rouillard, Jean-Marie, Yotova, Vania, Sindeaux, Renata, Ye, Chun Jimmie, Bikaran, Matin, Dumaine, Anne, Brinkworth, Jessica, F, Missiakas, Dominique, Rouleau, Guy, A, Steinrücken, Matthias, Pizarro-Cerdá, Javier, Poinar, Hendrik, N, Barreiro, Luis, B

المساهمون: University of Chicago, McMaster University Hamilton, Ontario, Daicel Arbor Biosciences Ann Arbor, MI, Yersinia, Université Paris Cité (UPCité)-Microbiologie Intégrative et Moléculaire (UMR6047), Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS)-Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS), Museum of London, University of South Carolina Columbia, University of Manitoba Winnipeg, University of Southern Denmark (SDU), Indiana University Bloomington, Indiana University System, Rutgers University Newark, Rutgers University System (Rutgers), Université de Montréal (UdeM), University of Michigan Ann Arbor, University of Michigan System, CHU Sainte Justine Montréal, University of California San Francisco (UC San Francisco), University of California (UC), University of Illinois at Urbana-Champaign Urbana (UIUC), University of Illinois System, McGill University = Université McGill Montréal, Canada, This work was supported by grant R01-GM134376 to LBB, HP, and JP-C, a grant from the Wenner-Gren Foundation to JB (8702), and the UChicago DDRCC, Center for Interdisciplinary Study of Inflammatory Intestinal Disorders (C-IID) (NIDDK P30 DK042086). HNP was supported by an Insight Grant #20008499 from the Social Sciences and Humanities Research Council of Canada (SSHRC) and The Canadian Institute for Advanced Research under the Humans and the Microbiome program. TPV was supported by NIH F32GM140568. XC and MSt were supported by grant R01GM146051.

المصدر: https://pasteur.hal.science/pasteur-04585452 ; 2024.

مصطلحات موضوعية: [SDV]Life Sciences [q-bio]

Relation: BIORXIV: 2023.04.06.535944

الاتاحة: https://pasteur.hal.science/pasteur-04585452
https://pasteur.hal.science/pasteur-04585452v1/document
https://pasteur.hal.science/pasteur-04585452v1/file/2023.04.06.535944v1.full.pdf
https://doi.org/10.1101/2023.04.06.535944

المؤلفون: Hawash, Mohamed B. F., Sanz-Remón, Joaquin, Grenier, Jean-Christophe, Kohn, Jordan, Yotova, Vania, Johnson, Zach, Lanford, Robert E., Brinkworth, Jessica F., Barreiro, Luis B.

المصدر: Proceedings of the National Academy of Sciences of the United States of America, 2021 Mar . 118(13), 1-10.

URL الوصول: https://www.jstor.org/stable/27039788

المؤلفون: Mendonca, Laura E., Pernet, Erwan, Khan, Nargis, Sanz, Joaquin, Kaufmann, Eva, Downey, Jeffrey, Grant, Alexandre, Orlova, Marianna, Schurr, Erwin, Krawczyk, Connie, Jones, Russell G., Barreiro, Luis B., Divangahi, Maziar

وصف الملف: application/pdf

Relation: http://zaguan.unizar.es/record/125329

الاتاحة: http://zaguan.unizar.es/record/125329
https://doi.org/10.3389/fimmu.2022.1044592

المؤلفون: Demeure, C, Poinar, Hendrik, N, Barreiro, Luis, B, Pizarro-Cerdá, Javier

المساهمون: Yersinia, Université Paris Cité (UPCité)-Microbiologie Intégrative et Moléculaire (UMR6047), Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS)-Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS), McMaster University Hamilton, Ontario, University of Chicago, NIH

المصدر: ISSN: 0767-0974.

مصطلحات موضوعية: peste noire, génétique humaine, ERAP2, sélection naturelle, [SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE], [SDV.IMM]Life Sciences [q-bio]/Immunology

Relation: info:eu-repo/semantics/altIdentifier/pmid/37094265; pasteur-04079814; https://pasteur.hal.science/pasteur-04079814; https://pasteur.hal.science/pasteur-04079814/document; https://pasteur.hal.science/pasteur-04079814/file/2023%20Demeure%20M%3ASc.pdf; PUBMED: 37094265

الاتاحة: https://pasteur.hal.science/pasteur-04079814
https://pasteur.hal.science/pasteur-04079814/document
https://pasteur.hal.science/pasteur-04079814/file/2023%20Demeure%20M%3ASc.pdf
https://doi.org/10.1051/medsci/2023050

المؤلفون: Shaw, Dustin G., Aguirre-Gamboa, Raúl, Vieira, Marcos C., Gona, Saideep, DiNardi, Nicholas, Wang, Anni, Dumaine, Anne, Gelderloos-Arends, Jody, Earley, Zachary M., Meckel, Katherine R., Ciszewski, Cezary, Castillo, Anabella, Monroe, Kelly, Torres, Joana, Shah, Shailja C., Colombel, Jean-Frédéric, Itzkowitz, Steven, Newberry, Rodney, Cohen, Russell D., Rubin, David T., Quince, Christopher, Cobey, Sarah, Jonkers, Iris H., Weber, Christopher R., Pekow, Joel, Wilson, Patrick C., Barreiro, Luis B., Jabri, Bana

Relation: https://www.nature.com/nm/; Nat Med. 2023 Jun 15; http://hdl.handle.net/10451/58252

الاتاحة: http://hdl.handle.net/10451/58252
https://doi.org/10.1038/s41591-023-02372-x

المؤلفون: Roche, Kimberly E., Bjork, Johannes R., Dasari, Mauna R., Grieneisen, Laura, Jansen, David, Gould, Trevor J., Gesquiere, Laurence R., Barreiro, Luis B., Alberts, Susan C., Blekhman, Ran, Gilbert, Jack A., Tung, Jenny, Mukherjee, Sayan, Archie, Elizabeth A.

المصدر: Roche , K E , Bjork , J R , Dasari , M R , Grieneisen , L , Jansen , D , Gould , T J , Gesquiere , L R , Barreiro , L B , Alberts , S C , Blekhman , R , Gilbert , J A , Tung , J , Mukherjee , S & Archie , E A 2023 , ' Universal gut microbial relationships in the gut microbiome of wild baboons ' , eLife , vol. 12 , e83152 . https://doi.org/10.7554/eLife.83152

وصف الملف: application/pdf

الاتاحة: https://hdl.handle.net/11370/6d83828a-23b4-4877-960e-abcc90dc5d17
https://research.rug.nl/en/publications/6d83828a-23b4-4877-960e-abcc90dc5d17
https://doi.org/10.7554/eLife.83152
https://pure.rug.nl/ws/files/830800834/Universal_gut_microbial_relationships_in_the_gut_microbiome_of_wild_baboons.pdf
http://www.scopus.com/inward/record.url?scp=85164047250&partnerID=8YFLogxK

المؤلفون: Earley, Zachary M., Lisicka, Wioletta, Sifakis, Joseph J., Aguirre-Gamboa, Raúl, Kowalczyk, Anita, Barlow, Jacob T., Shaw, Dustin G., Discepolo, Valentina, Tan, Ineke L., Gona, Saideep, Ernest, Jordan D., Matzinger, Polly, Barreiro, Luis B., Morgun, Andrey, Bendelac, Albert, Ismagilov, Rustem F., Shulzhenko, Natalia, Riesenfeld, Samantha J., Jabri, Bana

المصدر: Earley , Z M , Lisicka , W , Sifakis , J J , Aguirre-Gamboa , R , Kowalczyk , A , Barlow , J T , Shaw , D G , Discepolo , V , Tan , I L , Gona , S , Ernest , J D , Matzinger , P , Barreiro , L B , Morgun , A , Bendelac , A , Ismagilov , R F , Shulzhenko , N , Riesenfeld , S J & Jabri , B 2023 , ' GATA4 controls regionalization of tissue immunity and commensal-driven immunopathology ' , Immunity ....

مصطلحات موضوعية: bacterial colonization, celiac disease, GATA4, IgA, immunopathology, infection, intestinal epithelial cells, intestinal regionalization, retinoic acid, segmented filamentous bacteria

وصف الملف: application/pdf

الاتاحة: https://hdl.handle.net/11370/2624be58-2be8-41b0-b94b-5c7430707d4e
https://research.rug.nl/en/publications/2624be58-2be8-41b0-b94b-5c7430707d4e
https://doi.org/10.1016/j.immuni.2022.12.009
https://pure.rug.nl/ws/files/776324034/1-s2.0-S1074761322006458-main.pdf

المؤلفون: Groza, Cristian, Chen, Xun, Pacis, Alain, Simon, Marie-Michelle, Pramatarova, Albena, Aracena, Katherine A., Pastinen, Tomi, Barreiro, Luis B., Bourque, Guillaume

مصطلحات موضوعية: epigenomics, mobile elements, pangenomics, influenza

Relation: http://hdl.handle.net/2433/286481; Cell Genomics; 100294

الاتاحة: http://hdl.handle.net/2433/286481

المؤلفون: Chen, Xun, Pacis, Alain, Aracena, Katherine A., Gona, Saideep, Kwan, Tony, Groza, Cristian, Lin, Yen Lung, Sindeaux, Renata, Yotova, Vania, Pramatarova, Albena, Simon, Marie-Michelle, Pastinen, Tomi, Barreiro, Luis B., Bourque, Guillaume

مصطلحات موضوعية: transposable elements, Kruppel-associated box zinc finger proteins (KRAB-ZNFs), influenza infection, variable response, epigenetics, gene regulation

Relation: https://ashbi.kyoto-u.ac.jp/ja/news/20230510_research-result_xun-chen/; https://ashbi.kyoto-u.ac.jp/news/20230510_research-result_xun-chen/; http://hdl.handle.net/2433/282091; Cell Genomics; 100292

الاتاحة: http://hdl.handle.net/2433/282091

المؤلفون: Pernet, Erwan, Sun, Sarah, Sarden, Nicole, Gona, Saideep, Nguyen, Angela, Khan, Nargis, Mawhinney, Martin, Tran, Kim A., Chronopoulos, Julia, Amberkar, Dnyandeo, Sadeghi, Mina, Grant, Alexandre, Wali, Shradha, Prevel, Renaud, Ding, Jun, Martin, James G., Thanabalasuriar, Ajitha, Yipp, Bryan G., Barreiro, Luis B., Divangahi, Maziar

المصدر: Nature ; volume 614, issue 7948, page 530-538 ; ISSN 0028-0836 1476-4687

الاتاحة: http://dx.doi.org/10.1038/s41586-022-05660-7
https://www.nature.com/articles/s41586-022-05660-7.pdf
https://www.nature.com/articles/s41586-022-05660-7

المؤلفون: Sun, Sarah, Aguirre-Gamboa, Raúl, Barreiro, Luis B.

المساهمون: Digestive Diseases Reseach Core Center, University of Chicago, National Institutes of Health, Canadian Institutes of Health Research

المصدر: Frontiers in Immunology ; volume 14 ; ISSN 1664-3224

الاتاحة: http://dx.doi.org/10.3389/fimmu.2023.1129577
https://www.frontiersin.org/articles/10.3389/fimmu.2023.1129577/full