المؤلفون: Petersiel, Neta, Giulieri, Stefano, Daniel, Diane, Fan, Sook-Ha, Ersoy, Selvi, Davis, Joshua, Bayer, Arnold, Howden, Benjamin, Tong, Steven

المصدر: Antimicrobial Agents and Chemotherapy. 68(7)

مصطلحات موضوعية: MRSA, bacterial genomics, bloodstream-infections, methicillin-resistant Staphylococcus aureus, sodium bicarbonate (NaHCO3), β-lactams, Methicillin-Resistant Staphylococcus aureus, Microbial Sensitivity Tests, Humans, Anti-Bacterial Agents, Cefazolin, Staphylococcal Infections, Oxacillin, Bacteremia, Phenotype, beta-Lactams, Male, Sodium Bicarbonate, Female, Middle Aged

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/7bb7z3ts
https://escholarship.org/content/qt7bb7z3ts/qt7bb7z3ts.pdf

المؤلفون: Tu Luan, Seth Commichaux, Maria Hoffmann, Victor Jayeola, Jae Hee Jang, Mihai Pop, Hugh Rand, Yan Luo

المصدر: BMC Genomics, Vol 25, Iss 1, Pp 1-17 (2024)

مصطلحات موضوعية: Nanopore sequencing, Long read sequencing, Assembly polishing, Benchmarking, Bacterial genomics, Salmonella, Biotechnology, TP248.13-248.65, Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1471-2164

URL الوصول: https://doaj.org/article/5e843866bfc74f04884ca6746d393d87

المؤلفون: Jianyu Chen, Wenyin Du, Yuehe Li, Huiliu Zhou, Dejia Ouyang, Zhenjiang Yao, Jinjian Fu, Xiaohua Ye

المصدر: Microbiology Spectrum, Vol 12, Iss 10 (2024)

مصطلحات موضوعية: Staphylococcus aureus, genome-wide association study, genomic epidemiology, bacterial genomics, pathogenicity, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2165-0497

URL الوصول: https://doaj.org/article/75b05be0688447ff8c051f65a9931ff7

المؤلفون: Izabela Moura Duin, Vanessa Hitomi Sugahara Rodrigues, Rui Pereira Leite, Maria Isabel Balbi-Peña

المصدر: Agronomy, Vol 14, Iss 11, p 2495 (2024)

مصطلحات موضوعية: antimicrobial activity, Bacillus velezensis, bacterial genomics, biological control, biosynthetic gene clusters, molecular identification, Agriculture

وصف الملف: electronic resource

Relation: https://www.mdpi.com/2073-4395/14/11/2495; https://doaj.org/toc/2073-4395

URL الوصول: https://doaj.org/article/e5ec848edb174069a91c2391f5bcb85e

المؤلفون: Dvorkina, Tatiana, Bankevich, Anton, Sorokin, Alexei, Yang, Fan, Adu-Oppong, Boahemaa, Williams, Ryan, Turner, Keith, Pevzner, Pavel A

المصدر: Microbiome. 9(1)

مصطلحات موضوعية: Biological Sciences, Bioinformatics and Computational Biology, Genetics, Biotechnology, Human Genome, Algorithms, Genomics, Insecticides, Metagenome, Metagenomics, Bioinformatics, Gene finding, Bacterial genomics, Bioinsecticides, Ecology, Microbiology, Medical Microbiology, Evolutionary biology

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/7297f3v8
https://escholarship.org/content/qt7297f3v8/qt7297f3v8.pdf

المؤلفون: Hall, Michael B

المساهمون: Wick, Ryan R, Judd, Louise M, Nguyen, An N, Steinig, Eike J, Xie, Ouli, Davies, Mark R, Seemann, Torsten, Stinear, Timothy, Coin, Lachlan JM, Hall, Michael B

مصطلحات موضوعية: bioinformatics, microbial genomics, variant calling, nanopore, bacterial genomics, benchmark, sequencing

Relation: https://doi.org/10.7554/eLife.98300.3; https://doi.org/10.5281/zenodo.13984620; https://doi.org/10.5281/zenodo.13984621; oai:zenodo.org:13984621

الاتاحة: https://doi.org/10.5281/zenodo.13984621

المؤلفون: Geraldine J. Sullivan, Lars Barquist, Amy K. Cain

المصدر: mSystems, Vol 9, Iss 4 (2024)

مصطلحات موضوعية: data normalization, transposon insertion sequencing, RNA sequencing, chromosomal copy number, bacterial genomics, ciprofloxacin, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2379-5077

URL الوصول: https://doaj.org/article/ac50e67572e34d66a50ba59f68939010

المؤلفون: Jaromir Guzinski, Yue Tang, Marie Anne Chattaway, Timothy J. Dallman, Liljana Petrovska

المصدر: Frontiers in Microbiology, Vol 14 (2024)

مصطلحات موضوعية: source attribution, Salmonella Typhimurium, machine learning, random forest, core-genome multi locus sequence typing, bacterial genomics, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2023.1254860/full; https://doaj.org/toc/1664-302X

URL الوصول: https://doaj.org/article/f327f4f89b9d43a1978e2e5517d9fd29

المؤلفون: Hall, Michael

المساهمون: Iqbal, Zamin

مصطلحات موضوعية: bioinformatics, bacterial genomics, tuberculosis, nanopore sequencing, genome graphs

URL الوصول: https://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.848728

المؤلفون: Davison, Charlotte

مصطلحات موضوعية: coevolution, genomics, Human and bacterial genomics, diverse populations, Thesis

URL الوصول: https://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.832666

المؤلفون: Wei, Yahan, Palacios Araya, Dennise, Palmer, Kelli L.

المصدر: School of Podiatric Medicine Publications and Presentations

مصطلحات موضوعية: Antimicrobial resistance, Bacterial genomics, Bacterial pathogenesis, Pathogens, Microbiology, Podiatry

وصف الملف: application/pdf

Relation: https://scholarworks.utrgv.edu/sopm_pub/62; https://scholarworks.utrgv.edu/context/sopm_pub/article/1061/viewcontent/auto_convert.pdf

الاتاحة: https://scholarworks.utrgv.edu/sopm_pub/62
https://doi.org/10.1038/s41579-024-01058-6
https://scholarworks.utrgv.edu/context/sopm_pub/article/1061/viewcontent/auto_convert.pdf

المؤلفون: Maciel-Guerra, Alexandre, Babaarslan, Kubra, Baker, Michelle, Rahman, Aura, Hossain, Maqsud, Sadique, Abdus, Alam, Jahidul, Uzzaman, Salim, Ferdous, Mohammad, Ferdous Rahman Sarker, Mohammad, Sultana, Nasrin, Islam Khan, Ashraful Islam, Begum, Yasmin Ara, Afrad, Mokibul Hassan, Senin, Nicola, Habib, Zakir Hossain, Shirin, Tahmina, Qadri, Firdausi, Dottorini, Tania

مصطلحات موضوعية: Bacterial genomics, Data mining, Epidemiology, Genomics, Machine learning

Relation: https://nottingham-repository.worktribe.com/output/39982393; Nature Communications; Volume 15; Issue 1

الاتاحة: https://doi.org/10.1038/s41467-024-52238-0
https://nottingham-repository.worktribe.com/file/39982393/1/S41467-024-52238-0
https://nottingham-repository.worktribe.com/output/39982393

المؤلفون: Manirakiza, Eric, Chaumier, Timothée, Tirichine, Leïla

المساهمون: Unité en Sciences Biologiques et Biotechnologies de Nantes (US2B), Centre National de la Recherche Scientifique (CNRS)-Nantes Université - UFR de Médecine et des Techniques Médicales (Nantes Univ - UFR MEDECINE), Nantes Université - pôle Santé, Nantes Université (Nantes Univ)-Nantes Université (Nantes Univ)-Nantes Université - pôle Santé, Nantes Université (Nantes Univ)-Nantes Université (Nantes Univ), Institute for Marine and Antarctic Studies Hobart (IMAS), University of Tasmania Hobart (UTAS)

المصدر: EISSN: 2576-098X ; Microbiology Resource Announcements ; https://hal.science/hal-04785067 ; Microbiology Resource Announcements, 2024, 13 (10), pp.00373-24. ⟨10.1128/mra.00373-24⟩

مصطلحات موضوعية: Pseudomonas stutzeri, Pseudomonas chlororaphis, environmental microbiology, bacterial genomics, [SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology, [SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN]

الاتاحة: https://hal.science/hal-04785067
https://hal.science/hal-04785067v1/document
https://hal.science/hal-04785067v1/file/Pseudomonas.pdf
https://doi.org/10.1128/mra.00373-24

المؤلفون: Schwarzerová, Jana, Labanava, Anastasiya, Rychlík, Ivan, Varga, Margaret, Čejková, Darina

مصطلحات موضوعية: horizontal gene transfer, bacterial genomics, mobilome, microbiome, genome analysis

وصف الملف: text; application/pdf

Relation: Frontiers in Bacteriology; https://www.frontiersin.org/articles/10.3389/fbrio.2023.1275910/full; Frontiers in Bacteriology. 2023, vol. 2, issue 1, 8 p.; 185424; https://hdl.handle.net/11012/245103; orcid:0000-0003-2918-9313; orcid:0000-0002-6989-6330; 23099215700

الاتاحة: https://hdl.handle.net/11012/245103
https://doi.org/10.3389/fbrio.2023.1275910

المؤلفون: Buysse, Marie, Koual, Rachid, Binetruy, Florian, de Thoisy, Benoit, Baudrimont, Xavier, Garnier, Stéphane, Douine, Maylis, Chevillon, Christine, Delsuc, Frédéric, Catzeflis, François, Bouchon, Didier, Duron, Olivier

المساهمون: Maladies infectieuses et vecteurs : écologie, génétique, évolution et contrôle (MIVEGEC), Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD Occitanie )-Université de Montpellier (UM), Laboratoire des Interactions Virus-Hôtes Cayenne, Guyane Française, Institut Pasteur de la Guyane, Pasteur Network (Réseau International des Instituts Pasteur)-Pasteur Network (Réseau International des Instituts Pasteur), Association Kwata - Etude et protection de la nature Guyane, Direction Générale des Territoires et de la Mer de Guyane (DGTM Guyane), Biogéosciences UMR 6282 (BGS), Université de Bourgogne (UB)-Centre National de la Recherche Scientifique (CNRS), Centre d’investigation clinique Antilles Guyane (CIC INSERM 1424), Centre hospitalier de Cayenne, Institut des Sciences de l'Evolution de Montpellier (UMR ISEM), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-École Pratique des Hautes Études (EPHE), Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Institut de recherche pour le développement IRD : UR226-Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM), Écologie et biologie des interactions (EBI Poitiers ), Université de Poitiers = University of Poitiers (UP)-Centre National de la Recherche Scientifique (CNRS), the 2015–2020 State-Region Planning Contracts (CPER), the EuropeanRegional Development Fund (FEDER) of the University of Poitiers(BiodivUP project), the Malakit study funded by the European Union, theGlobal Fund, Cayenne Hospital and the French Guiana Health RegionalAgency, the ERA-Net Net-Biome 2010, the Fundação para a Ciência e aTecnologia, the Conseil Regional de Guyane, and the Conseil Regionalde Bourgogne, ANR-21-CE02-0002,MICROM,Compétition microbienne dans les interactions mutualistes chez les tiques(2021), ANR-10-LABX-0025,CEBA,CEnter of the study of Biodiversity in Amazonia(2010)

المصدر: ISSN: 2041-1723.

مصطلحات موضوعية: Bacterial genomics, Infectious-disease epidemiology, Pathogens, MESH: Anaplasma, MESH: Ehrlichia, MESH: Ehrlichiosis, MESH: Metagenomics, MESH: Genome, Bacterial, MESH: RNA, Ribosomal, 16S, MESH: Humans, MESH: Animals, MESH: Rainforest, MESH: Ticks, Wild, MESH: Phylogeny, MESH: Anaplasmosis, MESH: French Guiana, [SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/Parasitology

Relation: info:eu-repo/semantics/altIdentifier/pmid/38734682; PUBMED: 38734682; PUBMEDCENTRAL: PMC11088697

الاتاحة: https://u-bourgogne.hal.science/hal-04572981
https://u-bourgogne.hal.science/hal-04572981v1/document
https://u-bourgogne.hal.science/hal-04572981v1/file/s41467-024-48459-y.pdf
https://doi.org/10.1038/s41467-024-48459-y

المؤلفون: Subhojit Paul, Kaushika Olymon, Gustavo Sganzerla Martinez, Sharmilee Sarkar, Venkata Rajesh Yella, Aditya Kumar

مصطلحات موضوعية: Biochemistry, Microbiology, Genetics, Molecular Biology, Infectious Diseases, Biological Sciences not elsewhere classified, Information Systems not elsewhere classified, transcription initiation machinery, performance using accuracy, leveraged biologically relevant, dna duplex stability, bacterial genomes remains, 12 diverse genomes, predicting promoter regions, art machine learning, diverse bacterial systems, xgboost model ’, study presents mldspp, machine learning, diverse architecture, bacterial genomics, promoter characteristics, xgboost outperformed, structural features, random forests, propose mldspp, prokaryotes ), predictive capabilities, nonpromoter controls, namely sigma70pred

Relation: https://figshare.com/articles/journal_contribution/MLDSPP_Bacterial_Promoter_Prediction_Tool_Using_DNA_Structural_Properties_with_Machine_Learning_and_Explainable_AI/25047496

الاتاحة: https://doi.org/10.1021/acs.jcim.3c02017.s001
https://figshare.com/articles/journal_contribution/MLDSPP_Bacterial_Promoter_Prediction_Tool_Using_DNA_Structural_Properties_with_Machine_Learning_and_Explainable_AI/25047496

المؤلفون: Batisti Biffignandi, Gherard, Chindelevitch, Leonid, Corbella, Marta, Feil, Edward J, Sassera, Davide, Lees, John A

مصطلحات موضوعية: AMR, GWAS, Klebsiella pneumoniae, MIC, antibiotic resistance, bacterial genomics, machine learning, Reproducibility of Results, Anti-Bacterial Agents, Microbial Sensitivity Tests

وصف الملف: Print; application/pdf

Relation: https://www.repository.cam.ac.uk/handle/1810/369827

الاتاحة: https://www.repository.cam.ac.uk/handle/1810/369827

المؤلفون: Buenestado-Serrano, Sergio, Martínez-Lirola, Miguel, Herranz-Martín, Marta, Esteban, Jaime, Broncano-Lavado, Antonio, Molero-Salinas, Andrea, Sanz-Pérez, Amadeo, Blázquez Gómez, Jesús, Ruedas-López, Alba, Toro, Carlos, López-Roa, Paula, Domingo, Diego, Zamarrón, Ester, Ruiz Serrano, María Jesús, Muñoz, Patricia, Pérez-Lago, Laura, García de Viedma, Darío

المساهمون: Instituto de Salud Carlos III, European Commission, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España)

مصطلحات موضوعية: Bacterial genomics, Microbiology techniques

وصف الملف: application/pdf

Relation: #PLACEHOLDER_PARENT_METADATA_VALUE#; info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/PID2020-112865RB-I00/ES/EL SISTEMA MISMATCH REPAIR MICOBACTERIANO Y LA EVOLUCION HACIA LA RESISTENCIA A ANTIBIOTICOS EN MYCOBACTERIUM TUBERCULOSIS /; Publisher's version; https://doi.org/10.1038/s41467-024-46552-w; Sí; Nature Communications 15: 2717 (2024); http://hdl.handle.net/10261/357170; http://dx.doi.org/10.13039/501100004587; http://dx.doi.org/10.13039/501100011033; http://dx.doi.org/10.13039/501100000780

الاتاحة: http://hdl.handle.net/10261/357170
https://doi.org/10.1038/s41467-024-46552-w
https://doi.org/10.13039/501100004587
https://doi.org/10.13039/501100011033
https://doi.org/10.13039/501100000780

المؤلفون: Margaret D. Weinroth, Michael L. Clawson, Gregory P. Harhay, Mark Eppinger, Dayna M. Harhay, Timothy P. L. Smith, James L. Bono

المصدر: Frontiers in Microbiology, Vol 14 (2023)

مصطلحات موضوعية: whole genome sequencing (WGS), comparative genomics, bacterial genomics, STEC, Plasmids, Bacteriophage, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2023.1303387/full; https://doaj.org/toc/1664-302X

URL الوصول: https://doaj.org/article/d9a0306cf8ed46d69c809ab1697f8851

المؤلفون: Matheus Assis Côrtes Esteves, Alice Slotfeldt Viana, Gabriela Nogueira Viçosa, Ana Maria Nunes Botelho, Ahmed M. Moustafa, Felipe Raposo Passos Mansoldo, Adriana Lucia Pires Ferreira, Alane Beatriz Vermelho, Bernadete Teixeira Ferreira-Carvalho, Paul Joseph Planet, Agnes Marie Sá Figueiredo

المصدر: Frontiers in Microbiology, Vol 14 (2023)

مصطلحات موضوعية: emerging MRSA, rapid test for clonality detection, biomarker search, pangenome matrix, bacterial genomics, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2023.1275918/full; https://doaj.org/toc/1664-302X

URL الوصول: https://doaj.org/article/8712b56eb9034959a526b1420e8ce6e1