المؤلفون: Huanyu Z. Li, Ashley C. W. Pike, Yung-Ning Chang, Dheeraj Prakaash, Zuzana Gelova, Josefina Stanka, Christophe Moreau, Hannah C. Scott, Frank Wunder, Gernot Wolf, Andreea Scacioc, Gavin McKinley, Helena Batoulis, Shubhashish Mukhopadhyay, Andrea Garofoli, Adán Pinto-Fernández, Benedikt M. Kessler, Nicola A. Burgess-Brown, Saša Štefanić, Tabea Wiedmer, Katharina L. Dürr, Vera Puetter, Alexander Ehrmann, Syma Khalid, Alvaro Ingles-Prieto, Giulio Superti-Furga, David B. Sauer

المصدر: Nature Communications, Vol 16, Iss 1, Pp 1-14 (2025)

مصطلحات موضوعية: Science

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2041-1723

URL الوصول: https://doaj.org/article/958a9053d8d54652bca2feb39560186c

المؤلفون: Daniela Digles, Alvaro Ingles-Prieto, Vojtech Dvorak, Tamara A. M. Mocking, Ulrich Goldmann, Andrea Garofoli, Evert J. Homan, Alberto Di Silvio, Lucia Azzollini, Francesca Sassone, Mario Fogazza, Felix Bärenz, Antje Pommereau, Yasmin Zuschlag, Jasper F. Ooms, Jeppe Tranberg-Jensen, Jesper S. Hansen, Josefina Stanka, Hubert J. Sijben, Helena Batoulis, Eckhard Bender, Riccardo Martini, Adriaan P. IJzerman, David B. Sauer, Laura H. Heitman, Vania Manolova, Juergen Reinhardt, Alexander Ehrmann, Philipp Leippe, Gerhard F. Ecker, Kilian V. M. Huber, Thomas Licher, Lia Scarabottolo, Tabea Wiedmer, Giulio Superti-Furga

المصدر: Frontiers in Pharmacology, Vol 15 (2024)

مصطلحات موضوعية: solute carrier, transport protein, tool compound, KNIME, transport assay, Therapeutics. Pharmacology, RM1-950

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fphar.2024.1401599/full; https://doaj.org/toc/1663-9812

URL الوصول: https://doaj.org/article/d3ca8f18dbc2476ea3722a966b570ca6

المؤلفون: Antonio Rodriguez-Calero, John Gallon, Dilara Akhoundova, Sina Maletti, Alison Ferguson, Joanna Cyrta, Ursula Amstutz, Andrea Garofoli, Viola Paradiso, Scott A. Tomlins, Ekkehard Hewer, Vera Genitsch, Achim Fleischmann, Erik Vassella, Elisabeth J. Rushing, Rainer Grobholz, Ingeborg Fischer, Wolfram Jochum, Gieri Cathomas, Adeboye O. Osunkoya, Lukas Bubendorf, Holger Moch, George Thalmann, Charlotte K. Y. Ng, Silke Gillessen, Salvatore Piscuoglio, Mark A. Rubin

المصدر: Nature Communications, Vol 13, Iss 1, Pp 1-10 (2022)

مصطلحات موضوعية: Science

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2041-1723

URL الوصول: https://doaj.org/article/42966ddd44de4ed4a87861f3d4c3176c

المؤلفون: Mairene Coto‐Llerena, Nadia Tosti, Stephanie Taha‐Mehlitz, Venkatesh Kancherla, Viola Paradiso, John Gallon, Gaia Bianco, Andrea Garofoli, Souvik Ghosh, Fengyuan Tang, Caner Ercan, Gerhard M. Christofori, Matthias S. Matter, Raoul A. Droeser, Mihaela Zavolan, Savas D. Soysal, Markus vonFlüe, Otto Kollmar, Luigi M. Terracciano, Charlotte K. Y. Ng, Salvatore Piscuoglio

المصدر: Hepatology Communications, Vol 5, Iss 4, Pp 661-674 (2021)

مصطلحات موضوعية: Diseases of the digestive system. Gastroenterology, RC799-869

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2471-254X

URL الوصول: https://doaj.org/article/ad421c0d13494136915e7f00b44e48ef

المؤلفون: Sofia Karkampouna, Federico La Manna, Andrej Benjak, Mirjam Kiener, Marta De Menna, Eugenio Zoni, Joël Grosjean, Irena Klima, Andrea Garofoli, Marco Bolis, Arianna Vallerga, Jean-Philippe Theurillat, Maria R. De Filippo, Vera Genitsch, David Keller, Tijmen H. Booij, Christian U. Stirnimann, Kenneth Eng, Andrea Sboner, Charlotte K. Y. Ng, Salvatore Piscuoglio, Peter C. Gray, Martin Spahn, Mark A. Rubin, George N. Thalmann, Marianna Kruithof-de Julio

المصدر: Nature Communications, Vol 12, Iss 1, Pp 1-13 (2021)

مصطلحات موضوعية: Science

وصف الملف: electronic resource

Relation: https://doaj.org/toc/2041-1723

URL الوصول: https://doaj.org/article/74f8126482f64e7aa57d9156cdf767c0

المؤلفون: Luigi Tornillo, Frank Serge Lehmann, Andrea Garofoli, Viola Paradiso, Charlotte K. Y. Ng, Salvatore Piscuoglio

المصدر: Frontiers in Oncology, Vol 11 (2021)

مصطلحات موضوعية: colorectal cancer, serrated lesions, DNA sequencing, BRAF, tubulovillous adenoma, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fonc.2021.668466/full; https://doaj.org/toc/2234-943X

URL الوصول: https://doaj.org/article/b5ed97b734e94909a792225b6ba4a45a

المؤلفون: Andrea Garofoli, Robert Stanton, Tabea Wiedmer, Ulrich Goldmann, Barbara Steurer, Evandro Ferrada, Alvaro Ingles-Prieto

Relation: https://zenodo.org/communities/eu; https://zenodo.org/communities/resolution; https://doi.org/10.5281/zenodo.7319233; https://doi.org/10.5281/zenodo.7319234; oai:zenodo.org:7319234

الاتاحة: https://doi.org/10.5281/zenodo.7319234

المؤلفون: Andrea Garofoli, Robert Stanton, Tabea Wiedmer, Ulrich Goldmann, Barbara Steurer, Evandro Ferrada, Alvaro Ingles-Prieto

Relation: https://zenodo.org/communities/eu; https://zenodo.org/communities/resolution; https://doi.org/10.5281/zenodo.7319221; https://doi.org/10.5281/zenodo.7319222; oai:zenodo.org:7319222

الاتاحة: https://doi.org/10.5281/zenodo.7319222

المؤلفون: Daniela Digles, Alvaro Ingles-Prieto, Vojtech Dvorak, Tamara A. M. Mocking, Ulrich Goldmann, Andrea Garofoli, Evert J. Homan, Alberto Di Silvio, Lucia Azzollini, Francesca Sassone, Mario Fogazza, Felix Bärenz, Antje Pommereau, Yasmin Zuschlag, Jasper F. Ooms, Jeppe Tranberg-Jensen, Jesper S. Hansen, Josefina Stanka, Hubert J. Sijben, Helena Batoulis, Eckhard Bender, Riccardo Martini, Adriaan P. IJzerman, David B. Sauer, Laura H. Heitman, Vania Manolova, Juergen Reinhardt, Alexander Ehrmann, Philipp Leippe, Gerhard F. Ecker, Kilian V. M. Huber, Thomas Licher, Lia Scarabottolo, Tabea Wiedmer, Giulio Superti-Furga

مصطلحات موضوعية: Pharmacology, Basic Pharmacology, Clinical Pharmacology and Therapeutics, Clinical Pharmacy and Pharmacy Practice, Pharmaceutical Sciences, Pharmacogenomics, Toxicology (incl. Clinical Toxicology), Pharmacology and Pharmaceutical Sciences not elsewhere classified, solute carrier, transport protein, tool compound, KNIME, transport assay

Relation: https://figshare.com/articles/dataset/Table1_Advancing_drug_discovery_through_assay_development_a_survey_of_tool_compounds_within_the_human_solute_carrier_superfamily_XLSX/26211941

الاتاحة: https://doi.org/10.3389/fphar.2024.1401599.s001
https://figshare.com/articles/dataset/Table1_Advancing_drug_discovery_through_assay_development_a_survey_of_tool_compounds_within_the_human_solute_carrier_superfamily_XLSX/26211941

المؤلفون: Andrea, Garofoli, Désirée, Schnidrig, Charlotte K Y, Ng

المصدر: Methods in molecular biology (Clifton, N.J.). 2493

مصطلحات موضوعية: Neoplasms, High-Throughput Nucleotide Sequencing, Humans, Reproducibility of Results, Precision Medicine, Workflow

URL الوصول: https://explore.openaire.eu/search/publication?articleId=pmid________::f06d258fdb6f6be397db8fb5b91fe42d
https://pubmed.ncbi.nlm.nih.gov/35751816

المؤلفون: Desiree Schnidrig, Andrea Garofoli, Andrej Benjak, Gunnar Rätsch, Mark A. Rubin, Salvatore Piscuoglio, Charlotte K.Y. Ng

المصدر: Genomics, 115 (2)
Schnidrig, Desiree; Garofoli, Andrea; Benjak, Andrej; Rätsch, Gunnar; Rubin, Mark A; Piscuoglio, Salvatore; Ng, Charlotte K Y (2023). PipeIT2: A tumor-only somatic variant calling workflow for molecular diagnostic ion torrent sequencing data. Genomics, 115(2), p. 110587. Elsevier 10.1016/j.ygeno.2023.110587 <http://dx.doi.org/10.1016/j.ygeno.2023.110587>

مصطلحات موضوعية: Singularity, Ion torrent, Somatic mutations, Variant calling, Next-generation sequencing, Cancer genomics, Molecular diagnostics, Genetics, 610 Medicine & health

وصف الملف: application/application/pdf; application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::938183845eeb9812d5ea9a19a67cc975
https://doi.org/10.1016/j.ygeno.2023.110587

المؤلفون: Andrea Garofoli, Désirée Schnidrig, Charlotte K. Y. Ng

المصدر: Variant Calling ISBN: 9781071622926

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::00ed3f5e7665d395c6610da7d76092aa
https://doi.org/10.1007/978-1-0716-2293-3_12

المؤلفون: Hesam Montazeri, Salvatore Piscuoglio, Luigi Tornillo, Charlotte K.Y. Ng, Andrea Garofoli, Guglielmo Roma, Viola Paradiso, Philip Jermann, Luigi Terracciano

المصدر: The Journal of Molecular Diagnostics. 21:884-894

مصطلحات موضوعية: 0301 basic medicine, Computer science, business.industry, Ion semiconductor sequencing, Computational biology, Precision medicine, Molecular diagnostics, DNA sequencing, 3. Good health, Pathology and Forensic Medicine, 03 medical and health sciences, Software portability, 030104 developmental biology, 0302 clinical medicine, Workflow, Germline mutation, Software, 030220 oncology & carcinogenesis, Molecular Medicine, business

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::3105805cf194094ed28968965a41fa5e
https://doi.org/10.1016/j.jmoldx.2019.05.001

المؤلفون: Clémentine Le Magnen, Sina Maletti, Melanie Blind, Arnoud J. Templeton, David C Müller, Salvatore Piscuoglio, Tobias Zellweger, Raphaëlle Servant, Tatjana Vlajnic, Andrea Garofoli, Michele Garioni, Cyrill A. Rentsch, Mark A. Rubin, Heike Pueschel, Lukas Bubendorf, H.H. Seifert

المصدر: Servant, Raphaëlle; Garioni, Michele; Vlajnic, Tatjana; Blind, Melanie; Pueschel, Heike; Müller, David C; Zellweger, Tobias; Templeton, Arnoud J; Garofoli, Andrea; Maletti, Sina Laura; Piscuoglio, Salvatore; Rubin, Mark A.; Seifert, Helge; Rentsch, Cyrill A; Bubendorf, Lukas; Le Magnen, Clémentine (2021). Prostate cancer patient-derived organoids: detailed outcome from a prospective cohort of 81 clinical specimens. The journal of pathology, 254(5), pp. 543-555. Wiley 10.1002/path.5698 <http://dx.doi.org/10.1002/path.5698>
The Journal of Pathology

مصطلحات موضوعية: 0301 basic medicine, Oncology, Male, medicine.medical_specialty, Proliferation index, Cell Culture Techniques, Context (language use), 610 Medicine & health, Biology, Pathology and Forensic Medicine, Metastasis, Cohort Studies, 03 medical and health sciences, Prostate cancer, 0302 clinical medicine, Internal medicine, disease modeling, Organoid, medicine, PTEN, Humans, Prospective cohort study, Aged, Original Paper, Cancer, Prostatic Neoplasms, personalized medicine, Middle Aged, medicine.disease, prostate cancer, Original Papers, Organoids, phenotypic and molecular features, 030104 developmental biology, 030220 oncology & carcinogenesis, patient‐derived organoids, biology.protein

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d67c30d3a4fb414755c66229bd78fd80

المؤلفون: Elisabeth J. Rushing, Ursula Amstutz, Mark A. Rubin, Charlotte K.Y. Ng, Joanna Cyrta, Dilara Akhoundova, Vera Genitsch, Silke Gillessen Sommer, Ingeborg Fischer, Ekkehard Hewer, Holger Moch, Viola Paradiso, Lukas Bubendorf, Gieri Cathomas, Rainer Grobholz, Alison Ferguson, Achim Fleischmann, Salvatore Piscuoglio, John Gallon, Scott A. Tomlins, Antonio Rodriguez, Sina Maletti, Andrea Garofoli, Wolfram Jochum

مصطلحات موضوعية: MAPK/ERK pathway, biology, business.industry, medicine.disease, Transcriptome, Prostate cancer, Cancer cell, medicine, biology.protein, Cancer research, PTEN, business, Protein kinase B, PI3K/AKT/mTOR pathway, Brain metastasis

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::207b112a8319c6d2a22f10532d8d428a
https://doi.org/10.1101/2020.05.12.092296

المؤلفون: Charlotte K.Y. Ng, Marta De Menna, Andrea Garofoli, Maria R. De Filippo, Salvatore Piscuoglio, Federico La Manna, Eugenio Zoni, Marianna Kruithof-de Julio, Andrea Sboner, Christian U. Stirnimann, Irena Klima, Joel Grosjean, Mark A. Rubin, Martin Spahn, Vera Genitsch, Tijmen H. Booij, Sofia Karkampouna, David Keller, George N. Thalmann

المصدر: Journal of Urology. 203

مصطلحات موضوعية: Oncology, medicine.medical_specialty, Drug treatment, business.industry, Urology, Internal medicine, medicine, Organoid, Treatment resistance, business, medicine.disease, Early onset, Metastasis

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::d9856ec7f6bb9414b84534452d857cd6
https://doi.org/10.1097/ju.0000000000000969.07

المؤلفون: Mirjam Kiener, Marianna Kruithof-de Julio, George N. Thalmann, Salvatore Piscuoglio, Marta De Menna, Maria R. De Filippo, Federico La Manna, Peter C. Gray, Andrea Sboner, Eugenio Zoni, Charlotte K.Y. Ng, Jo eumll Grosjean, David Keller, Christian U. Stirnimann, Sofia Karkampouna, Marco Bolis, Tijmen H. Booij, Martin Spahn, Irena Klima, Mark A. Rubin, Kenneth Eng, Andrea Garofoli, Jean-Philippe Theurillat, Vera Genitsch

مصطلحات موضوعية: Sorafenib, Sunitinib, Ponatinib, Microsatellite instability, SPOP, Biology, medicine.disease, Primary tumor, chemistry.chemical_compound, Prostate cancer, chemistry, medicine, Organoid, Cancer research, medicine.drug

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c09746c2840b5fad6b8a316fd305ca52
https://doi.org/10.1101/2020.03.17.994350

المؤلفون: Joel Grosjean, Peter Clark Gray, Jean-Philippe Theurillat, Sofia Karkampouna, Andrea Sboner, M. De Menna, M.R. De Filippo, George N. Thalmann, Andrea Garofoli, Eugenio Zoni, Andrej Benjak, Marco Bolis, Vera Genitsch, David Keller, Charlotte K.Y. Ng, Salvatore Piscuoglio, Irena Klima, Mark A. Rubin, Kenneth Eng, Arianna Vallerga, Tijmen H. Booij, Julio Marianna Kruithof-de, F. La Manna, Christian U. Stirnimann, Mirjam Kiener

المصدر: European Urology. 79:S589-S590

مصطلحات موضوعية: Oncology, medicine.medical_specialty, Prostate cancer, Therapy response, business.industry, Urology, Internal medicine, Organoid, medicine, medicine.disease, business

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::eaa44e7ed221afeb45d0ef6414be2676
https://doi.org/10.1016/s0302-2838(21)00805-8

المؤلفون: Luigi Tornillo (48432), Frank Serge Lehmann (11550205), Andrea Garofoli (11550208), Viola Paradiso (7033094), Charlotte K. Y. Ng (7033088), Salvatore Piscuoglio (358881)

مصطلحات موضوعية: Cancer, Cancer Cell Biology, Cancer Diagnosis, Cancer Genetics, Cancer Therapy (excl. Chemotherapy and Radiation Therapy), Chemotherapy, Haematological Tumours, Molecular Targets, Radiation Therapy, Solid Tumours, Oncology and Carcinogenesis not elsewhere classified, colorectal cancer, serrated lesions, DNA sequencing, BRAF, tubulovillous adenoma

Relation: https://figshare.com/articles/dataset/Table_2_The_Genomic_Landscape_of_Serrated_Lesion_of_the_Colorectum_Similarities_and_Differences_With_Tubular_and_Tubulovillous_Adenomas_xlsx/16787434

الاتاحة: https://doi.org/10.3389/fonc.2021.668466.s002

المؤلفون: H. Seifert, Heike Pueschel, Salvatore Piscuoglio, Arnoud J. Templeton, C.A. Rentsch, L. Bubendorf, Z. Diamantopoulou, C. Le Magnen, R. Servant, Andrea Garofoli, David C Müller, Sina Maletti, Nicola Aceto, Tobias Zellweger, M. Garioni, Tatjana Vlajnic, Mark A. Rubin

المصدر: European Urology Open Science. 32:S173

مصطلحات موضوعية: Oncology, medicine.medical_specialty, Prostate cancer, business.industry, Urology, Internal medicine, medicine, Translational research, medicine.disease, business

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::e5cf0eb80fd09cf984b70cee49b153b4
https://doi.org/10.1016/s2666-1683(21)01193-9