المؤلفون: David A. Coil (7382090), Timothy Albertson (8417103), Shefali Banerjee (11021409), Greg Brennan (534922), A. J. Campbell (11021412), Stuart H. Cohen (11021415), Satya Dandekar (61929), Samuel L. Díaz-Muñoz (11021418), Jonathan A. Eisen (7382087), Tracey Goldstein (329930), Ivy R. Jose (11021421), Maya Juarez (11021424), Brandt A. Robinson (11021427), Stefan Rothenburg (66518), Christian Sandrock (10770242), Ana M. M. Stoian (4984688), Daniel G. Tompkins (11021430), Alexandre Tremeau-Bravard (11021433), Angela Haczku (87487)

مصطلحات موضوعية: Microbiology, Cell Biology, Molecular Biology, Biotechnology, Evolutionary Biology, Mental Health, Infectious Diseases, Virology, Biological Sciences not elsewhere classified, staff congregation areas, COVID -19 patient, surface swabs, Vero cell cultures, SARS-CoV -2 qRT-PCR positivity, sequencing, SARS-CoV -2 RNA, COVID -19 transmission, UC Davis Rationale, SARS-CoV -2 contamination, SARS-CoV -2 genomes, Davis Medical Center, hospital surface samples, infectivity, patient management practices, SARS-CoV -2 detection, cytopathic effects, SARS-CoV -2 genome sequences

Relation: https://figshare.com/articles/journal_contribution/Locations_of_samples_positive_for_SARS-CoV-2_by_qRT-PCR_/14840160

الاتاحة: https://doi.org/10.1371/journal.pone.0253578.s001

المؤلفون: David A. Coil (7382090), Timothy Albertson (8417103), Shefali Banerjee (11021409), Greg Brennan (534922), A. J. Campbell (11021412), Stuart H. Cohen (11021415), Satya Dandekar (61929), Samuel L. Díaz-Muñoz (11021418), Jonathan A. Eisen (7382087), Tracey Goldstein (329930), Ivy R. Jose (11021421), Maya Juarez (11021424), Brandt A. Robinson (11021427), Stefan Rothenburg (66518), Christian Sandrock (10770242), Ana M. M. Stoian (4984688), Daniel G. Tompkins (11021430), Alexandre Tremeau-Bravard (11021433), Angela Haczku (87487)

مصطلحات موضوعية: Microbiology, Cell Biology, Molecular Biology, Biotechnology, Evolutionary Biology, Mental Health, Infectious Diseases, Virology, Biological Sciences not elsewhere classified, staff congregation areas, COVID -19 patient, surface swabs, Vero cell cultures, SARS-CoV -2 qRT-PCR positivity, sequencing, SARS-CoV -2 RNA, COVID -19 transmission, UC Davis Rationale, SARS-CoV -2 contamination, SARS-CoV -2 genomes, Davis Medical Center, hospital surface samples, infectivity, patient management practices, SARS-CoV -2 detection, cytopathic effects, SARS-CoV -2 genome sequences

Relation: https://figshare.com/articles/journal_contribution/Locations_and_qRT-PCR_results_for_all_samples_collected_/14840163

الاتاحة: https://doi.org/10.1371/journal.pone.0253578.s002

المؤلفون: David A. Coil (7382090), Timothy Albertson (8417103), Shefali Banerjee (11021409), Greg Brennan (534922), A. J. Campbell (11021412), Stuart H. Cohen (11021415), Satya Dandekar (61929), Samuel L. Díaz-Muñoz (11021418), Jonathan A. Eisen (7382087), Tracey Goldstein (329930), Ivy R. Jose (11021421), Maya Juarez (11021424), Brandt A. Robinson (11021427), Stefan Rothenburg (66518), Christian Sandrock (10770242), Ana M. M. Stoian (4984688), Daniel G. Tompkins (11021430), Alexandre Tremeau-Bravard (11021433), Angela Haczku (87487)

مصطلحات موضوعية: Microbiology, Cell Biology, Molecular Biology, Biotechnology, Evolutionary Biology, Mental Health, Infectious Diseases, Virology, Biological Sciences not elsewhere classified, staff congregation areas, COVID -19 patient, surface swabs, Vero cell cultures, SARS-CoV -2 qRT-PCR positivity, sequencing, SARS-CoV -2 RNA, COVID -19 transmission, UC Davis Rationale, SARS-CoV -2 contamination, SARS-CoV -2 genomes, Davis Medical Center, hospital surface samples, infectivity, patient management practices, SARS-CoV -2 detection, cytopathic effects, SARS-CoV -2 genome sequences

Relation: https://figshare.com/articles/journal_contribution/Sequencing_information_for_5_MinION_runs_detailing_number_of_raw_reads_generated_and_the_amount_retained_at_each_step_of_the_bioinformatics_pipeline_/14840169

الاتاحة: https://doi.org/10.1371/journal.pone.0253578.s003

المؤلفون: David A. Coil (7382090), Timothy Albertson (8417103), Shefali Banerjee (11021409), Greg Brennan (534922), A. J. Campbell (11021412), Stuart H. Cohen (11021415), Satya Dandekar (61929), Samuel L. Díaz-Muñoz (11021418), Jonathan A. Eisen (7382087), Tracey Goldstein (329930), Ivy R. Jose (11021421), Maya Juarez (11021424), Brandt A. Robinson (11021427), Stefan Rothenburg (66518), Christian Sandrock (10770242), Ana M. M. Stoian (4984688), Daniel G. Tompkins (11021430), Alexandre Tremeau-Bravard (11021433), Angela Haczku (87487)

مصطلحات موضوعية: Microbiology, Cell Biology, Molecular Biology, Biotechnology, Evolutionary Biology, Mental Health, Infectious Diseases, Virology, Biological Sciences not elsewhere classified, staff congregation areas, COVID -19 patient, surface swabs, Vero cell cultures, SARS-CoV -2 qRT-PCR positivity, sequencing, SARS-CoV -2 RNA, COVID -19 transmission, UC Davis Rationale, SARS-CoV -2 contamination, SARS-CoV -2 genomes, Davis Medical Center, hospital surface samples, infectivity, patient management practices, SARS-CoV -2 detection, cytopathic effects, SARS-CoV -2 genome sequences

Relation: https://figshare.com/articles/figure/Representative_ward_room_sampled_by_swabs_for_SARS-CoV-2_at_the_UCDMC_/14840172

الاتاحة: https://doi.org/10.1371/journal.pone.0253578.g001

المؤلفون: David A. Coil (7382090), Timothy Albertson (8417103), Shefali Banerjee (11021409), Greg Brennan (534922), A. J. Campbell (11021412), Stuart H. Cohen (11021415), Satya Dandekar (61929), Samuel L. Díaz-Muñoz (11021418), Jonathan A. Eisen (7382087), Tracey Goldstein (329930), Ivy R. Jose (11021421), Maya Juarez (11021424), Brandt A. Robinson (11021427), Stefan Rothenburg (66518), Christian Sandrock (10770242), Ana M. M. Stoian (4984688), Daniel G. Tompkins (11021430), Alexandre Tremeau-Bravard (11021433), Angela Haczku (87487)

مصطلحات موضوعية: Microbiology, Cell Biology, Molecular Biology, Biotechnology, Evolutionary Biology, Mental Health, Infectious Diseases, Virology, Biological Sciences not elsewhere classified, staff congregation areas, COVID -19 patient, surface swabs, Vero cell cultures, SARS-CoV -2 qRT-PCR positivity, sequencing, SARS-CoV -2 RNA, COVID -19 transmission, UC Davis Rationale, SARS-CoV -2 contamination, SARS-CoV -2 genomes, Davis Medical Center, hospital surface samples, infectivity, patient management practices, SARS-CoV -2 detection, cytopathic effects, SARS-CoV -2 genome sequences

Relation: https://figshare.com/articles/figure/SARS-CoV-2_positive_patients_at_UCDMC_during_the_first_and_the_second_wave_of_COVID-19_/14840175

الاتاحة: https://doi.org/10.1371/journal.pone.0253578.g002

المؤلفون: David A. Coil (7382090), Timothy Albertson (8417103), Shefali Banerjee (11021409), Greg Brennan (534922), A. J. Campbell (11021412), Stuart H. Cohen (11021415), Satya Dandekar (61929), Samuel L. Díaz-Muñoz (11021418), Jonathan A. Eisen (7382087), Tracey Goldstein (329930), Ivy R. Jose (11021421), Maya Juarez (11021424), Brandt A. Robinson (11021427), Stefan Rothenburg (66518), Christian Sandrock (10770242), Ana M. M. Stoian (4984688), Daniel G. Tompkins (11021430), Alexandre Tremeau-Bravard (11021433), Angela Haczku (87487)

مصطلحات موضوعية: Microbiology, Cell Biology, Molecular Biology, Biotechnology, Evolutionary Biology, Mental Health, Infectious Diseases, Virology, Biological Sciences not elsewhere classified, staff congregation areas, COVID -19 patient, surface swabs, Vero cell cultures, SARS-CoV -2 qRT-PCR positivity, sequencing, SARS-CoV -2 RNA, COVID -19 transmission, UC Davis Rationale, SARS-CoV -2 contamination, SARS-CoV -2 genomes, Davis Medical Center, hospital surface samples, infectivity, patient management practices, SARS-CoV -2 detection, cytopathic effects, SARS-CoV -2 genome sequences

Relation: https://figshare.com/articles/figure/Micrographs_of_Vero_E6_cells_five_days_after_inoculation_/14840178

الاتاحة: https://doi.org/10.1371/journal.pone.0253578.g003

المؤلفون: David A. Coil (7382090), Timothy Albertson (8417103), Shefali Banerjee (11021409), Greg Brennan (534922), A. J. Campbell (11021412), Stuart H. Cohen (11021415), Satya Dandekar (61929), Samuel L. Díaz-Muñoz (11021418), Jonathan A. Eisen (7382087), Tracey Goldstein (329930), Ivy R. Jose (11021421), Maya Juarez (11021424), Brandt A. Robinson (11021427), Stefan Rothenburg (66518), Christian Sandrock (10770242), Ana M. M. Stoian (4984688), Daniel G. Tompkins (11021430), Alexandre Tremeau-Bravard (11021433), Angela Haczku (87487)

مصطلحات موضوعية: Microbiology, Cell Biology, Molecular Biology, Biotechnology, Evolutionary Biology, Mental Health, Infectious Diseases, Virology, Biological Sciences not elsewhere classified, staff congregation areas, COVID -19 patient, surface swabs, Vero cell cultures, SARS-CoV -2 qRT-PCR positivity, sequencing, SARS-CoV -2 RNA, COVID -19 transmission, UC Davis Rationale, SARS-CoV -2 contamination, SARS-CoV -2 genomes, Davis Medical Center, hospital surface samples, infectivity, patient management practices, SARS-CoV -2 detection, cytopathic effects, SARS-CoV -2 genome sequences

Relation: https://figshare.com/articles/figure/Phylogenetic_comparison_of_the_SARS-CoV-2_sequences_obtained_from_environmental_swabs_at_UCDMC_/14840184

الاتاحة: https://doi.org/10.1371/journal.pone.0253578.g005