المؤلفون: Damian Kołat, Żaneta Kałuzińska-Kołat, Katarzyna Kośla, Magdalena Orzechowska, Elżbieta Płuciennik, Andrzej K. Bednarek

المصدر: Frontiers in Genetics, Vol 14 (2023)

مصطلحات موضوعية: WWOX, LINC01137, miR-186, long non-coding RNA, microRNA, cap analysis gene expression sequencing, Genetics, QH426-470

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fgene.2023.1214968/full; https://doaj.org/toc/1664-8021

URL الوصول: https://doaj.org/article/d63a6de530c54cc5a805463a8d62a78c

المؤلفون: de Hoon, Michiel, Bonetti, Alessandro, Plessy, Charles, Ando, Yoshinari, Hon, Chung-Chau, Ishizu, Yuri, Itoh, Masayoshi, Kato, Sachi, Lin, Dongyan, Maekawa, Sho, Murata, Mitsuyoshi, Nishiyori, Hiromi, Shin, Jay W., Stolte, Jens, Suzuki, Ana Maria, Tagami, Michihira, Takahashi, Hazuki, Forrest, Alistair R. R., Hayashizaki, Yoshihide, Kere, Juha, Carninci, Piero, Thongjuea, Supat

المساهمون: STEMM - Stem Cells and Metabolism Research Program, Juha Kere / Principal Investigator, Research Programs Unit, HUS Helsinki and Uusimaa Hospital District

مصطلحات موضوعية: ANALYSIS GENE-EXPRESSION, POL II, TRANSCRIPTION, DATABASE, ARCHIVE, ATLAS, Biochemistry, cell and molecular biology, Medical biotechnology, Biomedicine

وصف الملف: application/pdf

Relation: This work was supported by a grant-in-aid for Young Scientists B from the Japan Society for the Promotion of Science (JSPS KAKENHI grant number JP23710222) to M.d.H., a Research Grant from the Ministry of Education, Culture, Sports, Science and Technology (MEXT) for the RIKEN Omics Science Center, a Research Grant from MEXT for the RIKEN Center for Life Science Technologies, and a Research Grant from MEXT for the RIKEN Center for Integrative Medical Sciences.; de Hoon , M , Bonetti , A , Plessy , C , Ando , Y , Hon , C-C , Ishizu , Y , Itoh , M , Kato , S , Lin , D , Maekawa , S , Murata , M , Nishiyori , H , Shin , J W , Stolte , J , Suzuki , A M , Tagami , M , Takahashi , H , Forrest , A R R , Hayashizaki , Y , Kere , J , Carninci , P & Thongjuea , S 2022 , ' Deep sequencing of short capped RNAs reveals novel families of noncoding RNAs ' , Genome Research , vol. 32 , no. 9 , pp. 1727-1735 . https://doi.org/10.1101/gr.276647.122; http://hdl.handle.net/10138/358260; 0f37a116-e354-4710-b4f9-b9813fcd5baf; 000863738800007

الاتاحة: http://hdl.handle.net/10138/358260

المؤلفون: Avesani, Sara, Lazazzara, Valentina, Robatscher, Peter, Oberhuber, Michael, Perazzolli, Michele

المساهمون: Avesani, Sara, Lazazzara, Valentina, Robatscher, Peter, Oberhuber, Michael, Perazzolli, Michele

مصطلحات موضوعية: Volatile organic compounds Induced systemic resistance Vitis vinifera Downy mildew Untargeted metabolomics analysis Gene expression

Relation: info:eu-repo/semantics/altIdentifier/wos/WOS:001097522000001; volume:35-36; firstpage:10029801; lastpage:10029811; numberofpages:11; journal:CURRENT PLANT BIOLOGY; https://hdl.handle.net/11572/391413; info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-85172465720; https://www.sciencedirect.com/science/article/pii/S2214662823000270?via=ihub

الاتاحة: https://hdl.handle.net/11572/391413
https://doi.org/10.1016/j.cpb.2023.100298
https://www.sciencedirect.com/science/article/pii/S2214662823000270?via=ihub

المؤلفون: Lei Ling, Mingjing Li, Naiyu Chen, Xinying Xie, Zihui Han, Guoling Ren, Yajie Yin, Huixin Jiang

المصدر: Genes; Volume 14; Issue 6; Pages: 1186

مصطلحات موضوعية: Avena sativa, NAC transcription factor, evolutionary analysis: gene expression

جغرافية الموضوع: agris

وصف الملف: application/pdf

Relation: Bioinformatics; https://dx.doi.org/10.3390/genes14061186

الاتاحة: https://doi.org/10.3390/genes14061186

المؤلفون: Yamatani, Kotoko, Ai, Tomohiko, Saito, Kaori, Suzuki, Koya, Hori, Atsushi, Kinjo, Sonoko, Ikeo, Kazuho, Ruvolo, Vivian, Zhang, Weiguo, Mak, Po Yee, Kaczkowski, Bogumil, Harada, Hironori, Katayama, Kazuhiro, Sugimoto, Yoshikazu, Myslinski, Jered, Hato, Takashi, Miida, Takashi, Konopleva, Marina, Hayashizaki, Yoshihide, Carter, Bing Z., Tabe, Yoko, Andreeff, Michael

المساهمون: Medicine, School of Medicine

المصدر: PMC

مصطلحات موضوعية: Venetoclax, Acute myeloid leukemia, Tyrosine kinase inhibitors, Cap analysis gene expression

وصف الملف: application/pdf

Relation: Translational Oncology; Yamatani K, Ai T, Saito K, et al. Inhibition of BCL2A1 by STAT5 inactivation overcomes resistance to targeted therapies of FLT3-ITD/D835 mutant AML. Transl Oncol. 2022;18:101354. doi:10.1016/j.tranon.2022.101354; https://hdl.handle.net/1805/32951

الاتاحة: https://hdl.handle.net/1805/32951

المساهمون: Birchler, James

المصدر: Other Information: PBD: 22 Apr 2004

وصف الملف: Medium: ED; Size: 36KB pages

URL الوصول: http://www.osti.gov/scitech/servlets/purl/822995

المؤلفون: Michiel de Hoon, Alessandro Bonetti, Charles Plessy, Yoshinari Ando, Chung-Chau Hon, Yuri Ishizu, Masayoshi Itoh, Sachi Kato, Dongyan Lin, Sho Maekawa, Mitsuyoshi Murata, Hiromi Nishiyori, Jay W. Shin, Jens Stolte, Ana Maria Suzuki, Michihira Tagami, Hazuki Takahashi, Supat Thongjuea, Alistair R.R. Forrest, Yoshihide Hayashizaki, Juha Kere, Piero Carninci

المساهمون: STEMM - Stem Cells and Metabolism Research Program, Juha Kere / Principal Investigator, Research Programs Unit

المصدر: Genome Research. 32:1727-1735

مصطلحات موضوعية: ANALYSIS GENE-EXPRESSION, 318 Medical biotechnology, DATABASE, Genetics, 1182 Biochemistry, cell and molecular biology, TRANSCRIPTION, 3111 Biomedicine, POL II, ATLAS, Genetics (clinical), ARCHIVE

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b41ee2adc0c8cc9602398a74888a4ad9
https://doi.org/10.1101/gr.276647.122

المؤلفون: Kan Saito, Aya Yamada, Daniel Martin, Tian Tian, Satoshi Fukumoto, Y Chiba, Keigo Yoshizaki, Kanako Miyazaki

المصدر: J Dent Res

مصطلحات موضوعية: Candidate gene, Cell type, Tooth regeneration, genetic processes, Research Reports, Computational biology, Biology, Cap analysis gene expression, Gene expression profiling, stomatognathic diseases, stomatognathic system, Single cell sequencing, Gene expression, natural sciences, General Dentistry, Gene

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::920461a45b553dd16550a472499646ee
https://doi.org/10.1177/00220345211049785

المؤلفون: Damian Kołat, Żaneta Kałuzińska-Kołat, Katarzyna Kośla, Magdalena Orzechowska, Elżbieta Płuciennik, Andrzej K. Bednarek

مصطلحات موضوعية: Genetics, Genetic Engineering, Biomarkers, Developmental Genetics (incl. Sex Determination), Epigenetics (incl. Genome Methylation and Epigenomics), Gene Expression (incl. Microarray and other genome-wide approaches), Genome Structure and Regulation, Genomics, Genetically Modified Animals, Livestock Cloning, Gene and Molecular Therapy, WWOX, LINC01137, miR-186, long non-coding RNA, microRNA, cap analysis gene expression sequencing, bioinformatics, bladder cancer

Relation: https://figshare.com/articles/dataset/Table1_LINC01137_miR-186-5p_WWOX_a_novel_axis_identified_from_WWOX-related_RNA_interactome_in_bladder_cancer_DOCX/23673564

الاتاحة: https://doi.org/10.3389/fgene.2023.1214968.s001
https://figshare.com/articles/dataset/Table1_LINC01137_miR-186-5p_WWOX_a_novel_axis_identified_from_WWOX-related_RNA_interactome_in_bladder_cancer_DOCX/23673564

المؤلفون: Cvetesic, N, Leitch, HG, Borkowska, M, Mueller, F, Carninci, P, Hajkova, P, Lenhard, B

المساهمون: Wellcome Trust, Commission of the European Communities

المصدر: 1956 ; 1943

مصطلحات موضوعية: Science & Technology, Life Sciences & Biomedicine, Biochemistry & Molecular Biology, Biotechnology & Applied Microbiology, Genetics & Heredity, ANALYSIS GENE-EXPRESSION, CAP-ANALYSIS, PROMOTER ELEMENT, GERM-CELL, RECOGNITION, DROSOPHILA, NANOCAGE, DPE, Animals, Gene Library, High-Throughput Nucleotide Sequencing, Mice, Promoter Regions, Genetic, RNA, Messenger, Sequence Analysis, Transcription Initiation Site, Bioinformatics, 06 Biological Sciences

Relation: Genome Research; http://hdl.handle.net/10044/1/66444; https://doi.org/10.1101/gr.235937.118; 106954/Z/15/Z; 648879

الاتاحة: http://hdl.handle.net/10044/1/66444
https://doi.org/10.1101/gr.235937.118

المؤلفون: Stephen C. J. Parker, Yasuhiro Kyono, Francis S. Collins, Ricardo D’Oliveira Albanus, Jacob O. Kitzman, Arushi Varshney, Collin Wang, Venkateswaran Ramamoorthi Elangovan, Peter Orchard, Narisu Narisu, Michael R. Erdos, Michael L. Stitzel

المصدر: Diabetes

مصطلحات موضوعية: geography, Reporter gene, geography.geographical_feature_category, Endocrinology, Diabetes and Metabolism, Pancreatic islets, Quantitative Trait Loci, Genetics/Genomes/Proteomics/Metabolomics, Computational biology, Biology, Islet, Polymorphism, Single Nucleotide, Cap analysis gene expression, Chromatin, Islets of Langerhans, Enhancer Elements, Genetic, medicine.anatomical_structure, Internal Medicine, medicine, Humans, Transcription Initiation Site, Enhancer, Gene, Genome-Wide Association Study, Epigenomics

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ebe2a39c0d7ca7574c7d0a4acf62193d
https://doi.org/10.2337/db20-1087

المؤلفون: Jiewei Liu, Xiong-Jian Luo, Junyang Wang, Ming Li, Hui-Juan Li, Xiaoyan Li, Xiao Xiao, Yong-Gang Yao

المصدر: Schizophrenia Bulletin

مصطلحات موضوعية: Adult, Risk, AcademicSubjects/MED00810, Quantitative Trait Loci, TWAS, Down-Regulation, Risk gene, Biology, eQTL, TMEM180, 03 medical and health sciences, 0302 clinical medicine, Mendelian randomization, medicine, Resource integration, Humans, Genetic Predisposition to Disease, Gene, 030304 developmental biology, Genetics, 0303 health sciences, Gene knockdown, Brain, Membrane Proteins, Mendelian Randomization Analysis, medicine.disease, Peripheral blood, schizophrenia, Psychiatry and Mental health, Schizophrenia, integrative analysis gene expression, Expression quantitative trait loci, 030217 neurology & neurosurgery, Genome-Wide Association Study, Regular Articles

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0548c3c4f5640c1ceaf868630cd9275c
https://doi.org/10.1093/schbul/sbab032

المؤلفون: Masafumi Horie, Akira Hebisawa, Yu Mikami, Maho Suzukawa, Akira Saito, Richard C. Boucher, Minako Saito, Hiroshi I. Suzuki, Takahide Nagase, Naoya Miyashita, Kenichi Okuda

المصدر: American Journal of Respiratory Cell and Molecular Biology. 63:831-842

مصطلحات موضوعية: 0301 basic medicine, Pulmonary and Respiratory Medicine, Lung, Chemistry, FORKHEAD BOX L1, Clinical Biochemistry, Cell Biology, medicine.disease, Structural framework, Cap analysis gene expression, Cell biology, 03 medical and health sciences, Idiopathic pulmonary fibrosis, 030104 developmental biology, 0302 clinical medicine, medicine.anatomical_structure, Super-enhancer, 030228 respiratory system, medicine, Fibroblast, Molecular Biology, Function (biology)

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::15d1e2337135c6d90edec701586d9d50
https://doi.org/10.1165/rcmb.2019-0396oc

المؤلفون: Nikos Perdikopanis, Ioannis Kavakiotis, Georgios Georgakilas, Dimitris Grigoriadis, Artemis G. Hatzigeorgiou, Vasileios Pierros, Panagiotis Alexiou

المصدر: UnpayWall
ORCID
Microsoft Academic Graph
PubMed Central
Nucleic Acids Research

مصطلحات موضوعية: Cell type, Transcription, Genetic, AcademicSubjects/SCI00010, Primary Cell Culture, Computational biology, Biology, ENCODE, Cell Line, 03 medical and health sciences, 0302 clinical medicine, microRNA, Genetics, Humans, Database Issue, Promoter Regions, Genetic, 030304 developmental biology, computer.programming_language, Internet, 0303 health sciences, Genome, Base Sequence, Fantom, Molecular Sequence Annotation, Promoter, Cap analysis gene expression, DNA binding site, MicroRNAs, Cell culture, 030220 oncology & carcinogenesis, Transcription Initiation Site, Databases, Nucleic Acid, computer, Software, Protein Binding, Transcription Factors

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::100a0472f4245d411f7884aa80487720
https://doi.org/10.1093/nar/gkaa1060

المؤلفون: Damian Boer, Hidetoshi Saze, Ngoc Tu Le, Saori Miura, Akira Kawabe, Yoshiko Harukawa

المصدر: Nature Communications, Vol 11, Iss 1, Pp 1-15 (2020)
Nature Communications
Nature Communications, 11(1)
Nature Communications 11 (2020) 1

مصطلحات موضوعية: 0301 basic medicine, Transcription, Genetic, Science, Arabidopsis, General Physics and Astronomy, Genes, Plant, General Biochemistry, Genetics and Molecular Biology, Article, Epigenesis, Genetic, 03 medical and health sciences, 0302 clinical medicine, Transcription (biology), Gene Expression Regulation, Plant, Consensus Sequence, Life Science, Gene silencing, Epigenetics, Laboratorium voor Plantenfysiologie, Transcriptomics, lcsh:Science, Gene, DNA Polymerase beta, Genetics, Regulation of gene expression, Multidisciplinary, DNA methylation, biology, Base Sequence, General Chemistry, biology.organism_classification, Cap analysis gene expression, 030104 developmental biology, Mutation, DNA Transposable Elements, lcsh:Q, RNA Polymerase II, Transcription Initiation Site, Transcriptome, Plant sciences, 030217 neurology & neurosurgery, Laboratory of Plant Physiology

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::86652de550e5d60a40d4e15c13552cc3
http://link.springer.com/article/10.1038/s41467-020-16951-w

المؤلفون: Chloé Bessière, Yoshihide Hayashizaki, Laurent Brehelin, Jordan A. Ramilowski, Manu Saraswat, Mathys Grapotte, Charles-Henri Lecellier, Michiel J. L. de Hoon, Masayoshi Itoh, Akira Hasegawa, Wyeth W. Wasserman, Jessica Severin, Christophe Menichelli, Piero Carninci, Harukazu Suzuki

المساهمون: Institut de Biologie Computationnelle (IBC), Institut National de Recherche en Informatique et en Automatique (Inria)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), RIKEN Center for Integrative Medical Sciences [Yokohama] (RIKEN IMS), RIKEN - Institute of Physical and Chemical Research [Japon] (RIKEN), University of British Columbia (UBC), Méthodes et Algorithmes pour la Bioinformatique (MAB), Laboratoire d'Informatique de Robotique et de Microélectronique de Montpellier (LIRMM), Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM), Institut de Génétique Moléculaire de Montpellier (IGMM), Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM), Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS), Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)

مصطلحات موضوعية: 0303 health sciences, microsatellite, Repertoire, short tandem repeat, deep learning, Promoter, Computational biology, Biology, non-coding transcription, medicine.disease, [SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM], Cap analysis gene expression, humanities, 03 medical and health sciences, 0302 clinical medicine, Transcription (biology), [SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN], medicine, Microsatellite, Enhancer, Gene, 030217 neurology & neurosurgery, Transcriptional noise, 030304 developmental biology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::25390ff2bc0d13dbcf9aec51d8dc062f
https://hal.archives-ouvertes.fr/hal-02404809

المؤلفون: Hsueh Fen Juan, Yueh-Hua Tu, Hsuan Cheng Huang

المصدر: BMC Genomics
BMC Genomics, Vol 22, Iss S3, Pp 1-8 (2021)

مصطلحات موضوعية: Systems biology, Cell state, Enhancer RNAs, Computational biology, QH426-470, Biology, Super-enhancer, Super-enhancer RNA, Genetics, RNA, Messenger, Enhancer, Gene, Messenger RNA, Enhancer RNA, Research, RNA, Cell Differentiation, Super enhancer, Cap analysis gene expression, FANTOM5, Histone, Enhancer Elements, Genetic, biology.protein, DNA microarray, TP248.13-248.65, Biotechnology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c09787aaad320a29453afdbd35b6a26b
https://pubmed.ncbi.nlm.nih.gov/34727867

المؤلفون: Akira Hasegawa, Takeya Kasukawa, Imad Abugessaisa, Luca Ducoli, Eliane Sibler, Michihira Tagami, Piero Carninci, Naoto Kondo, Masayoshi Itoh, Michiel J. L. de Hoon, Jay W. Shin, Saumya Agrawal, Michael Detmar, Chung-Chau Hon, Harukazu Suzuki, Jordan A. Ramilowski

المصدر: BMC Genomic Data
BMC Genomic Data, 22 (1)

مصطلحات موضوعية: Adult, Antisense oligonucleotide, ASO, CAGE-Seq, Cap analysis of gene expression, Long noncoding RNA, lncRNA, Cell type, Health Informatics, Computational biology, Biology, Transcriptome, Lymphatic System, Gene expression, Genetics, Humans, Gene knockdown, Research, Endothelial Cells, Oligonucleotides, Antisense, Cap analysis gene expression, Long non-coding RNA, Lymphatic system, Organ Specificity, Gene Knockdown Techniques, Antisense oligonucleotides, RNA, Long Noncoding

وصف الملف: application/application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::aa419ae41ce2fb33c2ef77926017e924
http://europepmc.org/articles/PMC8439024

المؤلفون: Paola Miyazato, Saiful Islam, Benjy J. Y. Tan, Michiyo Tokunaga, Yorifumi Satou, Hiroo Katsuya, Jumpei Ito, Yasuhiro Murakawa, Misaki Matsuo

المصدر: Retrovirology, Vol 16, Iss 1, Pp 1-11 (2019)
Retrovirology

مصطلحات موضوعية: lcsh:Immunologic diseases. Allergy, viruses, ZAP, Antiviral protein, Viremia, Virus, Cell Line, 03 medical and health sciences, 0302 clinical medicine, Retrovirus, Proviruses, Virology, Sense (molecular biology), Tropical spastic paraparesis, medicine, Humans, RNA Processing, Post-Transcriptional, RNA, Small Interfering, 030304 developmental biology, Human T-lymphotropic virus 1, 0303 health sciences, biology, Post-transcriptional regulation, Research, RNA-Binding Proteins, biology.organism_classification, medicine.disease, Cap analysis gene expression, Retroviral latency, Infectious Diseases, Gene Expression Regulation, HTLV-1, Gene Knockdown Techniques, biology.protein, HIV-1, Antibody, lcsh:RC581-607, Dinucleoside Phosphates, 030217 neurology & neurosurgery, HeLa Cells

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8c483cd3fb4a1dce5cbd09034d52e367
https://doaj.org/article/fcfb96766f324f098bceeab63e57303a

المؤلفون: Robin Andersson, Kristoffer Vitting-Seerup, Albin Sandelin, Malte Thodberg, Axel Thieffry

المصدر: BMC Bioinformatics, Vol 20, Iss 1, Pp 1-13 (2019)
BMC Bioinformatics
Thodberg, M, Thieffry, A, Vitting-Seerup, K, Andersson, R & Sandelin, A 2019, ' CAGEfightR : analysis of 5'-end data using R/Bioconductor ', BMC Bioinformatics, vol. 20, 487 . https://doi.org/10.1186/s12859-019-3029-5

مصطلحات موضوعية: Computer science, Base pair, Bioconductor, Enhancer RNAs, Computational biology, lcsh:Computer applications to medicine. Medical informatics, Biochemistry, Transcriptome, 03 medical and health sciences, 0302 clinical medicine, Transcription start site, Structural Biology, Transcription (biology), 5 '-end methods, Transcriptional regulation, Enhancer, Molecular Biology, Gene, lcsh:QH301-705.5, 030304 developmental biology, 0303 health sciences, Enhancer RNA, Applied Mathematics, Gene Expression Profiling, RNA, Promoter, Cap analysis gene expression, Computer Science Applications, Identification (information), lcsh:Biology (General), CAGE, lcsh:R858-859.7, 5′-end methods, DNA microarray, R-package, Transcription Initiation Site, 030217 neurology & neurosurgery, Software

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8ac1519f7b22280994b0edf497904b69
http://link.springer.com/article/10.1186/s12859-019-3029-5