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1Academic Journal
المؤلفون: Davide Noto (5330249), Antonina Giammanco (5330255), Rossella Spina (10232076), Francesca Fayer (10232079), Angelo B. Cefalù (10232082), Maurizio R. Averna (10232085)
مصطلحات موضوعية: Biochemistry, Genetics, Molecular Biology, Ecology, Computational Biology, Biological Sciences not elsewhere classified, Convolutional Neural Network analys., cholesterol sensors, cholesterol-related gene expression., SRE-NFY, SRE sequences, 250 bp, TF ChIP, 100 bp sequences, target sequences, SREBPs binding sites, 500 bp, NFY sequences, target elements arrangements, chromosomal localization, CNN, DNA sequence analysis, cholesterol metabolism, novel DNA patterns, transcription factors Y proximity, TF Immunoprecipitation, NF-Y, SP, Convolutional Neural Network, binding site
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2Academic Journal
المؤلفون: SAMY SELIM, NASHWA HAGAGY
المصدر: Scientific Study & Research: Chemistry & Chemical Engineering, Biotechnology, Food Industry, Vol 19, Iss 1, Pp 91-96 (2018)
مصطلحات موضوعية: we have performed metagenomic analysis of fresh water lake with focus on bacterial community using 454 pyrosequencing techniques. Roche GS FLX software indicated total of 156.253 reads, 15.226 contigs having > 100 bp sequence length whereas 10.481 contigs with > 500 bp sequence length. We have analyzed the bacterial community composition using BLASTN/BLASTX against NT/NR databases with E-value cutoff of 10-5. We have observed a wide array of bacteria from phylum proteobacteria and family Enterobacteriaceae as well as very few viruses from Podoviridae, Siphoviridae and unclassified phages. Moreover, a functional analysis of all 5974 contigs using Rapid Annotation by Subsystem Technology (RAST) was performed and detected 15.319 coding sequences and 197 RNAs in 619 subsystems. The great diversity of microflora present in the lake may reflect the human activity in the area, Freshwater Lake, functional genes, Metagenomics, microbial diversity, 454 pyrosequencing, Chemical technology, TP1-1185
وصف الملف: electronic resource
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3Academic Journal
المصدر: Microorganisms; Volume 7; Issue 3; Pages: 81
مصطلحات موضوعية: DNA topology is investigated that involves two types of DNA coiling, the first type is right-handed coils that Watson/Crick DNA strands adopt by winding around each other every 10.6 base pairs, the second type involves coiling of the double strands around each other in either a left handed (−) or right handed (+) direction, DNA gyrase is an enzyme with two protein subunits, GyrA and GyrB that catalyzes (−) supercoiling at the expense of ATP hydrolysis, gamma delta (γδ) resolvase is a site-specific recombinase from the γδ transposon the that utilizes (−) supercoils to delete a DNA sequence that is flanked by 100 bp Res sites, gyrase processivity refers to the number of reaction cycles one enzyme carries out in a single DNA binding event, the Q10 rule states that reaction rates double for every 10° C increase in temperature, the GyrA C-terminal domain (CTD) includes a long DNA binding section that has 6 pinwheel elements plus a short 35–38 amino acid terminus called the tail, RNA polymerase (RNAP), the E. coli and Salmonella condensin is a multi-protein complex composed of three proteins, MukB, MukE, and MukF that compacts chromosomal DNA
جغرافية الموضوع: agris
وصف الملف: application/pdf
Relation: Molecular Microbiology and Immunology; https://dx.doi.org/10.3390/microorganisms7030081
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4Image
مصطلحات موضوعية: Biophysics, Microbiology, Cell Biology, Genetics, Evolutionary Biology, Ecology, Cancer, Infectious Diseases, Plant Biology, Virology, Biological Sciences not elsewhere classified,
+radiation%22">xlink "> radiation, revealed unique features, may help clarify, large dna alterations, estimated mutation frequencies, arabidopsis seeds heterozygous, 2 &# 8211, 10 &# 8211, 0 &# 8211, e ., frequency, 99 bp ), irradiated plant genomes, genome sequencing analysis, genome sequencing analyses, including structural variations, detect various types, anthocyanin biosynthetic genes, 100 bp ) -
5Image
مصطلحات موضوعية: Biophysics, Microbiology, Cell Biology, Genetics, Evolutionary Biology, Ecology, Cancer, Infectious Diseases, Plant Biology, Virology, Biological Sciences not elsewhere classified,
+radiation%22">xlink "> radiation, revealed unique features, may help clarify, large dna alterations, estimated mutation frequencies, arabidopsis seeds heterozygous, 2 &# 8211, 10 &# 8211, 0 &# 8211, e ., frequency, 99 bp ), irradiated plant genomes, genome sequencing analysis, genome sequencing analyses, including structural variations, detect various types, anthocyanin biosynthetic genes, 100 bp ) -
6
مصطلحات موضوعية: Biophysics, Microbiology, Cell Biology, Genetics, Evolutionary Biology, Ecology, Cancer, Infectious Diseases, Plant Biology, Virology, Biological Sciences not elsewhere classified,
+radiation%22">xlink "> radiation, revealed unique features, may help clarify, large dna alterations, estimated mutation frequencies, arabidopsis seeds heterozygous, 2 &# 8211, 10 &# 8211, 0 &# 8211, e ., frequency, 99 bp ), irradiated plant genomes, genome sequencing analysis, genome sequencing analyses, including structural variations, detect various types, anthocyanin biosynthetic genes, 100 bp ) -
7
مصطلحات موضوعية: Biophysics, Microbiology, Cell Biology, Genetics, Evolutionary Biology, Ecology, Cancer, Infectious Diseases, Plant Biology, Virology, Biological Sciences not elsewhere classified,
+radiation%22">xlink "> radiation, revealed unique features, may help clarify, large dna alterations, estimated mutation frequencies, arabidopsis seeds heterozygous, 2 &# 8211, 10 &# 8211, 0 &# 8211, e ., frequency, 99 bp ), irradiated plant genomes, genome sequencing analysis, genome sequencing analyses, including structural variations, detect various types, anthocyanin biosynthetic genes, 100 bp ) -
8Image
مصطلحات موضوعية: Biophysics, Microbiology, Cell Biology, Genetics, Evolutionary Biology, Ecology, Cancer, Infectious Diseases, Plant Biology, Virology, Biological Sciences not elsewhere classified,
+radiation%22">xlink "> radiation, revealed unique features, may help clarify, large dna alterations, estimated mutation frequencies, arabidopsis seeds heterozygous, 2 &# 8211, 10 &# 8211, 0 &# 8211, e ., frequency, 99 bp ), irradiated plant genomes, genome sequencing analysis, genome sequencing analyses, including structural variations, detect various types, anthocyanin biosynthetic genes, 100 bp ) -
9
مصطلحات موضوعية: Biophysics, Microbiology, Cell Biology, Genetics, Evolutionary Biology, Ecology, Cancer, Infectious Diseases, Plant Biology, Virology, Biological Sciences not elsewhere classified,
+radiation%22">xlink "> radiation, revealed unique features, may help clarify, large dna alterations, estimated mutation frequencies, arabidopsis seeds heterozygous, 2 &# 8211, 10 &# 8211, 0 &# 8211, e ., frequency, 99 bp ), irradiated plant genomes, genome sequencing analysis, genome sequencing analyses, including structural variations, detect various types, anthocyanin biosynthetic genes, 100 bp ) -
10Image
مصطلحات موضوعية: Biophysics, Microbiology, Cell Biology, Genetics, Evolutionary Biology, Ecology, Cancer, Infectious Diseases, Plant Biology, Virology, Biological Sciences not elsewhere classified,
+radiation%22">xlink "> radiation, revealed unique features, may help clarify, large dna alterations, estimated mutation frequencies, arabidopsis seeds heterozygous, 2 &# 8211, 10 &# 8211, 0 &# 8211, e ., frequency, 99 bp ), irradiated plant genomes, genome sequencing analysis, genome sequencing analyses, including structural variations, detect various types, anthocyanin biosynthetic genes, 100 bp ) -
11Image
مصطلحات موضوعية: Biophysics, Microbiology, Cell Biology, Genetics, Evolutionary Biology, Ecology, Cancer, Infectious Diseases, Plant Biology, Virology, Biological Sciences not elsewhere classified,
+radiation%22">xlink "> radiation, revealed unique features, may help clarify, large dna alterations, estimated mutation frequencies, arabidopsis seeds heterozygous, 2 &# 8211, 10 &# 8211, 0 &# 8211, e ., frequency, 99 bp ), irradiated plant genomes, genome sequencing analysis, genome sequencing analyses, including structural variations, detect various types, anthocyanin biosynthetic genes, 100 bp ) -
12Image
مصطلحات موضوعية: Biophysics, Microbiology, Cell Biology, Genetics, Evolutionary Biology, Ecology, Cancer, Infectious Diseases, Plant Biology, Virology, Biological Sciences not elsewhere classified,
+radiation%22">xlink "> radiation, revealed unique features, may help clarify, large dna alterations, estimated mutation frequencies, arabidopsis seeds heterozygous, 2 &# 8211, 10 &# 8211, 0 &# 8211, e ., frequency, 99 bp ), irradiated plant genomes, genome sequencing analysis, genome sequencing analyses, including structural variations, detect various types, anthocyanin biosynthetic genes, 100 bp ) -
13Image
مصطلحات موضوعية: Biophysics, Microbiology, Cell Biology, Genetics, Evolutionary Biology, Ecology, Cancer, Infectious Diseases, Plant Biology, Virology, Biological Sciences not elsewhere classified,
+radiation%22">xlink "> radiation, revealed unique features, may help clarify, large dna alterations, estimated mutation frequencies, arabidopsis seeds heterozygous, 2 &# 8211, 10 &# 8211, 0 &# 8211, e ., frequency, 99 bp ), irradiated plant genomes, genome sequencing analysis, genome sequencing analyses, including structural variations, detect various types, anthocyanin biosynthetic genes, 100 bp ) -
14
مصطلحات موضوعية: Biophysics, Microbiology, Cell Biology, Genetics, Evolutionary Biology, Ecology, Cancer, Infectious Diseases, Plant Biology, Virology, Biological Sciences not elsewhere classified,
+radiation%22">xlink "> radiation, revealed unique features, may help clarify, large dna alterations, estimated mutation frequencies, arabidopsis seeds heterozygous, 2 &# 8211, 10 &# 8211, 0 &# 8211, e ., frequency, 99 bp ), irradiated plant genomes, genome sequencing analysis, genome sequencing analyses, including structural variations, detect various types, anthocyanin biosynthetic genes, 100 bp ) -
15Image
مصطلحات موضوعية: Biophysics, Microbiology, Cell Biology, Genetics, Evolutionary Biology, Ecology, Cancer, Infectious Diseases, Plant Biology, Virology, Biological Sciences not elsewhere classified,
+radiation%22">xlink "> radiation, revealed unique features, may help clarify, large dna alterations, estimated mutation frequencies, arabidopsis seeds heterozygous, 2 &# 8211, 10 &# 8211, 0 &# 8211, e ., frequency, 99 bp ), irradiated plant genomes, genome sequencing analysis, genome sequencing analyses, including structural variations, detect various types, anthocyanin biosynthetic genes, 100 bp ) -
16Image
مصطلحات موضوعية: Biophysics, Microbiology, Cell Biology, Genetics, Evolutionary Biology, Ecology, Cancer, Infectious Diseases, Plant Biology, Virology, Biological Sciences not elsewhere classified,
+radiation%22">xlink "> radiation, revealed unique features, may help clarify, large dna alterations, estimated mutation frequencies, arabidopsis seeds heterozygous, 2 &# 8211, 10 &# 8211, 0 &# 8211, e ., frequency, 99 bp ), irradiated plant genomes, genome sequencing analysis, genome sequencing analyses, including structural variations, detect various types, anthocyanin biosynthetic genes, 100 bp ) -
17Image
مصطلحات موضوعية: Biophysics, Microbiology, Cell Biology, Genetics, Evolutionary Biology, Ecology, Cancer, Infectious Diseases, Plant Biology, Virology, Biological Sciences not elsewhere classified,
+radiation%22">xlink "> radiation, revealed unique features, may help clarify, large dna alterations, estimated mutation frequencies, arabidopsis seeds heterozygous, 2 &# 8211, 10 &# 8211, 0 &# 8211, e ., frequency, 99 bp ), irradiated plant genomes, genome sequencing analysis, genome sequencing analyses, including structural variations, detect various types, anthocyanin biosynthetic genes, 100 bp ) -
18Image
مصطلحات موضوعية: Biophysics, Microbiology, Cell Biology, Genetics, Evolutionary Biology, Ecology, Cancer, Infectious Diseases, Plant Biology, Virology, Biological Sciences not elsewhere classified,
+radiation%22">xlink "> radiation, revealed unique features, may help clarify, large dna alterations, estimated mutation frequencies, arabidopsis seeds heterozygous, 2 &# 8211, 10 &# 8211, 0 &# 8211, e ., frequency, 99 bp ), irradiated plant genomes, genome sequencing analysis, genome sequencing analyses, including structural variations, detect various types, anthocyanin biosynthetic genes, 100 bp ) -
19Image
مصطلحات موضوعية: Biophysics, Microbiology, Cell Biology, Genetics, Evolutionary Biology, Ecology, Cancer, Infectious Diseases, Plant Biology, Virology, Biological Sciences not elsewhere classified,
+radiation%22">xlink "> radiation, revealed unique features, may help clarify, large dna alterations, estimated mutation frequencies, arabidopsis seeds heterozygous, 2 &# 8211, 10 &# 8211, 0 &# 8211, e ., frequency, 99 bp ), irradiated plant genomes, genome sequencing analysis, genome sequencing analyses, including structural variations, detect various types, anthocyanin biosynthetic genes, 100 bp ) -
20
مصطلحات موضوعية: Biophysics, Microbiology, Cell Biology, Genetics, Evolutionary Biology, Ecology, Cancer, Infectious Diseases, Plant Biology, Virology, Biological Sciences not elsewhere classified,
+radiation%22">xlink "> radiation, revealed unique features, may help clarify, large dna alterations, estimated mutation frequencies, arabidopsis seeds heterozygous, 2 &# 8211, 10 &# 8211, 0 &# 8211, e ., frequency, 99 bp ), irradiated plant genomes, genome sequencing analysis, genome sequencing analyses, including structural variations, detect various types, anthocyanin biosynthetic genes, 100 bp )