المؤلفون: Jiang, Y., Oron, T. R., Clark, W. T., Bankapur, A. R., D'Andrea, D., Lepore, R., Funk, C. S., Kahanda, I., Verspoor, K. M., Ben Hur, A., Koo, D. C. E., Penfold Brown, D., Shasha, D., Youngs, N., Bonneau, R., Lin, A., Sahraeian, S. M. E., Martelli, P. L., Profiti, G., Casadio, R., Cao, R., Zhong, Z., Cheng, J., Altenhoff, A., Skunca, N., Dessimoz, C., Dogan, T., Hakala, K., Kaewphan, S., Mehryary, F., Salakoski, T., Ginter, F., Fang, H., Smithers, B., Oates, M., Gough, J., Törönen, P., Koskinen, P., Holm, L., Chen, C., Hsu, W., Bryson, K., Cozzetto, D., Minneci, F., Jones, D. T., Chapman, S., Bkc, D., Khan, I. K., Kihara, D., Ofer, D., Rappoport, N., Stern, A., Cibrian Uhalte, E., Denny, P., Foulger, R. E., Hieta, R., Legge, D., Lovering, R. C., Magrane, M., Melidoni, A. N., Mutowo Meullenet, P., Pichler, K., Shypitsyna, A., Li, B., Zakeri, P., Elshal, S., Tranchevent, L., Das, S., Dawson, N. L., Lee, D., Lees, J. G., Sillitoe, I., Bhat, P., Nepusz, T., Romero, A. E., Sasidharan, R., Yang, H., Paccanaro, A., Gillis, J., Sedeño Cortés, A. E., Pavlidis, P., Feng, S., Cejuela, J. M., Goldberg, T., Hamp, T., Richter, L., Salamov, A., Gabaldon, T., Marcet Houben, M., Supek, F., Gong, Q., Ning, W., Zhou, Y., Tian, W., Falda, M., Lavezzo, E., Toppo, S., Ferrari, C., Giollo, M., Piovesan, D., Tosatto, S. C. E., Del Pozo, A., Fernández, J. M., Maietta, P., Valencia, A., Tress, M. L., Benso, A., Di Carlo, S., Politano, G., Savino, A., Rehman, H. U., Re, M., Mesiti, M., Valentini, G., Bargsten, J. W., van Dijk, A. D. J., Gemovic, B., Glisic, S., Perovic, V., Veljkovic, V., Veljkovic, N., Almeida E. Silva, D. C., Vencio, R. Z. N., Sharan, M., Vogel, J., Kansakar, L., Zhang, S., Vucetic, S., Wang, Z., Sternberg, M. J. E., Wass, M. N., Huntley, R. P., Martin, M. J., O'Donovan, C., Robinson, P. N., Moreau, Y., Tramontano, A., Babbitt, P. C., Brenner, S. E., Linial, M., Orengo, C. A., Rost, B., Greene, C. S., Mooney, S. D., Friedberg, I., Radivojac, P., Fontana, Paolo

المساهمون: Jiang, Y., Oron, T.R., Clark, W.T., Bankapur, A.R., D'Andrea, D., Lepore, R., Funk, C.S., Kahanda, I., Verspoor, K.M., Ben Hur, A., Koo, D.C.E., Penfold Brown, D., Shasha, D., Youngs, N., Bonneau, R., Lin, A., Sahraeian, S.M.E., Martelli, P.L., Profiti, G., Casadio, R., Cao, R., Zhong, Z., Cheng, J., Altenhoff, A., Skunca, N., Dessimoz, C., Dogan, T., Hakala, K., Kaewphan, S., Mehryary, F., Salakoski, T., Ginter, F., Fang, H., Smithers, B., Oates, M., Gough, J., Törönen, P., Koskinen, P., Holm, L., Chen, C., Hsu, W., Bryson, K., Cozzetto, D., Minneci, F., Jones, D.T., Chapman, S., Bkc, D., Khan, I.K., Kihara, D., Ofer, D., Rappoport, N., Stern, A., Cibrian Uhalte, E., Denny, P., Foulger, R.E., Hieta, R., Legge, D., Lovering, R.C., Magrane, M., Melidoni, A.N., Mutowo Meullenet, P., Pichler, K., Shypitsyna, A., Li, B., Zakeri, P., Elshal, S., Tranchevent, L., Das, S., Dawson, N.L., Lee, D., Lees, J.G., Sillitoe, I., Bhat, P., Nepusz, T., Romero, A.E., Sasidharan, R., Yang, H., Paccanaro, A., Gillis, J., Sedeño Cortés, A.E., Pavlidis, P., Feng, S., Cejuela, J.M., Goldberg, T., Hamp, T., Richter, L., Salamov, A., Gabaldon, T., Marcet Houben, M., Supek, F., Gong, Q., Ning, W., Zhou, Y., Tian, W., Falda, M., Fontana, P., Lavezzo, E., Toppo, S., Ferrari, C., Giollo, M.

مصطلحات موضوعية: Protein function prediction, Disease gene prioritization, Settore BIO/11 - BIOLOGIA MOLECOLARE

Relation: info:eu-repo/semantics/altIdentifier/pmid/27604469; info:eu-repo/semantics/altIdentifier/wos/WOS:000383428200001; volume:17; issue:184; firstpage:1; lastpage:19; journal:GENOME BIOLOGY; http://hdl.handle.net/10449/37272; info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-84986207718

الاتاحة: http://hdl.handle.net/10449/37272
https://doi.org/10.1186/s13059-016-1037-6

المؤلفون: Jiang, Y, Oron, TR, Clark, WT, Bankapur, AR, D'Andrea, D, Lepore, R, Funk, CS, Kahanda, I, Verspoor, KM, Ben-Hur, A, Koo, DCE, Penfold-Brown, D, Shasha, D, Youngs, N, Bonneau, R, Lin, A, Sahraeian, SME, Martelli, PL, Profiti, G, Casadio, R, Cao, R, Zhong, Z, Cheng, J, Altenhoff, A, Skunca, N, Dessimoz, C, Dogan, T, Hakala, K, Kaewphan, S, Mehryary, F, Salakoski, T, Ginter, F, Fang, H, Smithers, B, Oates, M, Gough, J, Toronen, P, Koskinen, P, Holm, L, Chen, C-T, Hsu, W-L, Bryson, K, Cozzetto, D, Minneci, F, Jones, DT, Chapman, S, Dukka, BKC, Khan, IK, Kihara, D, Ofer, D, Rappoport, N, Stern, A, Cibrian-Uhalte, E, Denny, P, Foulger, RE, Hieta, R, Legge, D, Lovering, RC, Magrane, M, Melidoni, AN, Mutowo-Meullenet, P, Pichler, K, Shypitsyna, A, Li, B, Zakeri, P, ElShal, S, Tranchevent, L-C, Das, S, Dawson, NL, Lee, D, Lees, JG, Sillitoe, I, Bhat, P, Nepusz, T, Romero, AE, Sasidharan, R, Yang, H, Paccanaro, A, Gillis, J, Sedeno-Cortes, AE, Pavlidis, P, Feng, S, Cejuela, JM, Goldberg, T, Hamp, T, Richter, L, Salamov, A, Gabaldon, T, Marcet-Houben, M, Supek, F, Gong, Q, Ning, W, Zhou, Y, Tian, W, Falda, M, Fontana, P, Lavezzo, E, Toppo, S, Ferrari, C, Giollo, M, Piovesan, D, Tosatto, SCE, del Pozo, A, Fernandez, JM, Maietta, P, Valencia, A, Tress, ML, Benso, A, Di Carlo, S, Politano, G, Savino, A, Rehman, HU, Re, M, Mesiti, M, Valentini, G, Bargsten, JW, van Dijk, ADJ, Gemovic, B, Glisic, S, Perovic, V, Veljkovic, V, Veljkovic, N, Almeida-e-Silva, DC, Vencio, RZN, Sharan, M, Vogel, J, Kansakar, L, Zhang, S, Vucetic, S, Wang, Z, Sternberg, MJE, Wass, MN, Huntley, RP, Martin, MJ, O'Donovan, C, Robinson, PN, Moreau, Y, Tramontano, A, Babbitt, PC, Brenner, SE, Linial, M, Orengo, CA, Rost, B, Greene, CS, Mooney, SD, Friedberg, I, Radivojac, P

Relation: pii: 10.1186/s13059-016-1037-6; Jiang, Y., Oron, T. R., Clark, W. T., Bankapur, A. R., D'Andrea, D., Lepore, R., Funk, C. S., Kahanda, I., Verspoor, K. M., Ben-Hur, A., Koo, D. C. E., Penfold-Brown, D., Shasha, D., Youngs, N., Bonneau, R., Lin, A., Sahraeian, S. M. E., Martelli, P. L., Profiti, G. ,. Radivojac, P. (2016). An expanded evaluation of protein function prediction methods shows an improvement in accuracy. GENOME BIOLOGY, 17 (1), https://doi.org/10.1186/s13059-016-1037-6.; http://hdl.handle.net/11343/118413

الاتاحة: http://hdl.handle.net/11343/118413

المؤلفون: Gaudet, P, Škunca, N, Hu, JC, Dessimoz, C

المصدر: The Gene Ontology Handbook pp. 25-37. (2016)

مصطلحات موضوعية: Gene Ontology structure, Evidence codes, Annotations, Gene association fi le (GAF), GO files, Function, Vocabulary, Annotation evidence

وصف الملف: text

Relation: https://discovery.ucl.ac.uk/id/eprint/1476112/1/Dessimoz_10.1007%252F978-1-4939-3743-1_chapter3.pdf; https://discovery.ucl.ac.uk/id/eprint/1476112/

الاتاحة: https://discovery.ucl.ac.uk/id/eprint/1476112/1/Dessimoz_10.1007%252F978-1-4939-3743-1_chapter3.pdf
https://discovery.ucl.ac.uk/id/eprint/1476112/

المؤلفون: Radivojac, P., Clark, W. T., Oron, T. R., Schnoes, A. M., Wittkop, T., Sokolov, A., Graim, K., Funk, C., Verspoor, K., Ben Hur, A., Pandey, G., Yunes, J. M., Talwalkar, A. S., Repo, S., Souza, M. L., Piovesan, D., Casadio, R., Wang, Z., Cheng, J. L., Fang, H., Goughl, J., Koskinen, P., Toronen, P., Nokso Koivisto, J., Holm, L., Cozzetto, D., Buchan, D. W. A., Bryson, K., Jones, D. T., Limaye, B., Inamdar, H., Datta, A., Manjari, S. K., Joshi, R., Chitale, M., Kihara, D., Lisewski, A. M., Erdin, S., Venner, E., Lichtarge, O., Rentzsch, R., Yang, H. X., Romero, A. E., Bhat, P., Paccanaro, A., Hamp, T., Kassner, R., Seemayer, S., Vicedo, E., Schaefer, C., Achten, D., Auer, F., Boehm, A., Braun, T., Hecht, M., Heron, M., Honigschmid, P., Hopf, T. A., Kaufmann, S., Kiening, M., Krompass, D., Landerer, C., Mahlich, Y., Roos, M., Bjorne, J., Salakoski, T., Wong, A., Shatkay, H., Gatzmann, F., Sommer, I., Wass, M. N., Sternberg, M. J. E., Skunca, N., Supek, F., Bosnjak, M., Panov, P., Dzeroski, S., Smuc, T., Kourmpetis, Y. A. I., van Dijk, A. D. J., ter Braak, C. J. F., Zhou, Y. P., Gong, Q. T., Dong, X. R., Tian, W. D., Falda, M., Lavezzo, E., Di Camillo, B., Toppo, S., Lan, L., Djuric, N., Guo, Y. H., Vucetic, S., Bairoch, A., Linial, M., Babbitt, P. C., Brenner, S. E., Orengo, C., Rost, B., Mooney, S. D., Friedberg, I., Fontana, Paolo

المساهمون: Radivojac, P., Clark, W.T., Oron, T.R., Schnoes, A.M., Wittkop, T., Sokolov, A., Graim, K., Funk, C., Verspoor, K., Ben Hur, A., Pandey, G., Yunes, J.M., Talwalkar, A.S., Repo, S., Souza, M.L., Piovesan, D., Casadio, R., Wang, Z., Cheng, J.L., Fang, H., Goughl, J., Koskinen, P., Toronen, P., Nokso Koivisto, J., Holm, L., Cozzetto, D., Buchan, D.W.A., Bryson, K., Jones, D.T., Limaye, B., Inamdar, H., Datta, A., Manjari, S.K., Joshi, R., Chitale, M., Kihara, D., Lisewski, A.M., Erdin, S., Venner, E., Lichtarge, O., Rentzsch, R., Yang, H.X., Romero, A.E., Bhat, P., Paccanaro, A., Hamp, T., Kassner, R., Seemayer, S., Vicedo, E., Schaefer, C., Achten, D., Auer, F., Boehm, A., Braun, T., Hecht, M., Heron, M., Honigschmid, P., Hopf, T.A., Kaufmann, S., Kiening, M., Krompass, D., Landerer, C., Mahlich, Y., Roos, M., Bjorne, J., Salakoski, T., Wong, A., Shatkay, H., Gatzmann, F., Sommer, I., Wass, M.N., Sternberg, M.J.E., Skunca, N., Supek, F., Bosnjak, M., Panov, P., Dzeroski, S., Smuc, T., Kourmpetis, Y.A.I., van Dijk, A.D.J., ter Braak, C.J.F., Zhou, Y.P., Gong, Q.T., Dong, X.R., Tian, W.D., Falda, M., Fontana, P., Lavezzo, E., Di Camillo, B., Toppo, S., Lan, L., Djuric, N., Guo, Y.H., Vucetic, S., Bairoch, A., Linial, M., Babbitt, P.C., Brenner, S.E., Orengo, C., Rost, B.

مصطلحات موضوعية: Settore BIO/11 - BIOLOGIA MOLECOLARE

Relation: info:eu-repo/semantics/altIdentifier/wos/WOS:000347030200002; volume:10; issue:3; firstpage:221; lastpage:227; journal:NATURE METHODS; http://hdl.handle.net/10449/22010; info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-84874663959; http://www.nature.com/nmeth/journal/v10/n3/pdf/nmeth.2340.pdf

الاتاحة: http://hdl.handle.net/10449/22010
https://doi.org/10.1038/NMETH.2340
http://www.nature.com/nmeth/journal/v10/n3/pdf/nmeth.2340.pdf

المؤلفون: Bastian, F.B., Chibucos, M.C., Gaudet, P., Giglio, M., Holliday, G.L., Huang, H., Lewis, S.E., Niknejad, A., Orchard, S., Poux, S., Skunca, N., Robinson-Rechavi, M.

المصدر: Database, vol. 2015, pp. bav043

وصف الملف: application/pdf

Relation: info:eu-repo/semantics/altIdentifier/pmid/25957950; info:eu-repo/semantics/altIdentifier/eissn/1758-0463; info:eu-repo/semantics/altIdentifier/urn/urn:nbn:ch:serval-BIB_60CACFAC405E9; https://serval.unil.ch/notice/serval:BIB_60CACFAC405E; https://serval.unil.ch/resource/serval:BIB_60CACFAC405E.P001/REF.pdf

الاتاحة: https://serval.unil.ch/notice/serval:BIB_60CACFAC405E
https://doi.org/10.1093/database/bav043
https://serval.unil.ch/resource/serval:BIB_60CACFAC405E.P001/REF.pdf
http://nbn-resolving.org/urn/resolver.pl?urn=urn:nbn:ch:serval-BIB_60CACFAC405E9

المؤلفون: Skunca, N., Dessimoz, C.

المصدر: Plos One, vol. 10, no. 2, pp. e0114701

مصطلحات موضوعية: Genetic Variation, Genomics/methods, Molecular Sequence Annotation, Phylogeny

وصف الملف: application/pdf

Relation: info:eu-repo/semantics/altIdentifier/pmid/25679783; info:eu-repo/semantics/altIdentifier/eissn/1932-6203; info:eu-repo/semantics/altIdentifier/urn/urn:nbn:ch:serval-BIB_BCB3501714F58; https://serval.unil.ch/notice/serval:BIB_BCB3501714F5; https://serval.unil.ch/resource/serval:BIB_BCB3501714F5.P001/REF.pdf

الاتاحة: https://serval.unil.ch/notice/serval:BIB_BCB3501714F5
https://doi.org/10.1371/journal.pone.0114701
https://serval.unil.ch/resource/serval:BIB_BCB3501714F5.P001/REF.pdf
http://nbn-resolving.org/urn/resolver.pl?urn=urn:nbn:ch:serval-BIB_BCB3501714F58

المؤلفون: Egger, B, Lapraz, F, Tomiczek, B, Müller, S, Dessimoz, C, Girstmair, J, Škunca, N, Rawlinson, KA, Cameron, CB, Beli, E, Todaro, MA, Gammoudi, M, Noreña, C, Telford, MJ

المصدر: Curr Biol , 25 (10) pp. 1347-1353. (2015)

وصف الملف: text

Relation: https://discovery.ucl.ac.uk/id/eprint/1466616/1/1-s2.0-S0960982215003498-main.pdf; https://discovery.ucl.ac.uk/id/eprint/1466616/

الاتاحة: https://discovery.ucl.ac.uk/id/eprint/1466616/1/1-s2.0-S0960982215003498-main.pdf
https://discovery.ucl.ac.uk/id/eprint/1466616/

المؤلفون: Altenhoff, AM, Škunca, N, Glover, N, Train, CM, Sueki, A, Piližota, I, Gori, K, Tomiczek, B, Müller, S, Redestig, H, Gonnet, GH, Dessimoz, C

المصدر: Nucleic Acids Res , 43 (Database issue) D240 - D249. (2015)

وصف الملف: application/pdf

Relation: https://discovery.ucl.ac.uk/id/eprint/1457206/1/Nucl._Acids_Res.-2015-Altenhoff-D240-9.pdf; https://discovery.ucl.ac.uk/id/eprint/1457206/

الاتاحة: https://discovery.ucl.ac.uk/id/eprint/1457206/1/Nucl._Acids_Res.-2015-Altenhoff-D240-9.pdf
https://discovery.ucl.ac.uk/id/eprint/1457206/

المؤلفون: Ravenhall, M, Skunca, N, Lassalle, F, Dessimoz, C

مصطلحات موضوعية: Science & Technology, Life Sciences & Biomedicine, Biochemical Research Methods, Mathematical & Computational Biology, Biochemistry & Molecular Biology, ESCHERICHIA-COLI, TRANSFER EVENTS, BDELLOVIBRIO-BACTERIOVORUS, PATHOGENICITY ISLANDS, THERMOTOGA-MARITIMA, GENOMIC SIGNATURE, SURROGATE METHODS, DNA-SEQUENCE, EVOLUTION, INFERENCE, Base Composition, Computational Biology, Computer Simulation, DNA, Bacterial, Databases, Genetic, Drug Resistance, Molecular, Gene Transfer, Horizontal, Genomics, Humans, Models, Statistical

Relation: PLoS Computational Biology; http://hdl.handle.net/10044/1/49639; https://dx.doi.org/10.1371/journal.pcbi.1004095

الاتاحة: http://hdl.handle.net/10044/1/49639
https://doi.org/10.1371/journal.pcbi.1004095

المؤلفون: Peng, X, Alföldi, J, Gori, K, Eisfeld, AJ, Tyler, SR, Tisoncik-Go, J, Brawand, D, Law, GL, Skunca, N, Hatta, M, Gasper, DJ, Kelly, SM, Chang, J, Thomas, MJ, Johnson, J, Berlin, AM, Lara, M, Russell, P, Swofford, R, Turner-Maier, J, Young, S, Hourlier, T, Aken, B, Searle, S, Sun, X, Yi, Y, Suresh, M, Tumpey, TM, Siepel, A, Wisely, SM, Dessimoz, C, Kawaoka, Y, Birren, BW, Lindblad-Toh, K, Di Palma, F, Engelhardt, JF, Palermo, RE, Katze, MG

المصدر: Nature Biotechnology , 32 (12) pp. 1250-1255. (2014)

وصف الملف: text

Relation: https://discovery.ucl.ac.uk/id/eprint/1457207/1/Peng%20et%20al.%20The%20draft%20genome%20sequence%20of%20the%20ferret.pdf; https://discovery.ucl.ac.uk/id/eprint/1457207/

الاتاحة: https://discovery.ucl.ac.uk/id/eprint/1457207/1/Peng%20et%20al.%20The%20draft%20genome%20sequence%20of%20the%20ferret.pdf
https://discovery.ucl.ac.uk/id/eprint/1457207/

المؤلفون: Radivojac, P, Clark, WT, Oron, TR, Schnoes, AM, Wittkop, T, Sokolov, A, Graim, K, Funk, C, Verspoor, K, Ben-Hur, A, Pandey, G, Yunes, JM, Talwalkar, AS, Repo, S, Souza, ML, Piovesan, D, Casadio, R, Wang, Z, Cheng, J, Fang, H, Goughl, J, Koskinen, P, Toronen, P, Nokso-Koivisto, J, Holm, L, Cozzetto, D, Buchan, DWA, Bryson, K, Jones, DT, Limaye, B, Inamdar, H, Datta, A, Manjari, SK, Joshi, R, Chitale, M, Kihara, D, Lisewski, AM, Erdin, S, Venner, E, Lichtarge, O, Rentzsch, R, Yang, H, Romero, AE, Bhat, P, Paccanaro, A, Hamp, T, Kassner, R, Seemayer, S, Vicedo, E, Schaefer, C, Achten, D, Auer, F, Boehm, A, Braun, T, Hecht, M, Heron, M, Hoenigschmid, P, Hopf, TA, Kaufmann, S, Kiening, M, Krompass, D, Landerer, C, Mahlich, Y, Roos, M, Bjorne, J, Salakoski, T, Wong, A, Shatkay, H, Gatzmann, F, Sommer, I, Wass, MN, Sternberg, MJE, Skunca, N, Supek, F, Bosnjak, M, Panov, P, Dzeroski, S, Smuc, T, Kourmpetis, YAI, van Dijk, ADJ, ter Braak, CJF, Zhou, Y, Gong, Q, Dong, X, Tian, W, Falda, M, Fontana, P, Lavezzo, E, Di Camillo, B, Toppo, S, Lan, L, Djuric, N, Guo, Y, Vucetic, S, Bairoch, A, Linial, M, Babbitt, PC, Brenner, SE, Orengo, C, Rost, B, Mooney, SD, Friedberg, I

Relation: pii: nmeth.2340; Radivojac, P., Clark, W. T., Oron, T. R., Schnoes, A. M., Wittkop, T., Sokolov, A., Graim, K., Funk, C., Verspoor, K., Ben-Hur, A., Pandey, G., Yunes, J. M., Talwalkar, A. S., Repo, S., Souza, M. L., Piovesan, D., Casadio, R., Wang, Z., Cheng, J. ,. Friedberg, I. (2013). A large-scale evaluation of computational protein function prediction. NATURE METHODS, 10 (3), pp.221-227. https://doi.org/10.1038/NMETH.2340.; http://hdl.handle.net/11343/127455

الاتاحة: http://hdl.handle.net/11343/127455

المؤلفون: Dessimoz, C, Skunca, N, Thomas, PD

المصدر: Trends in Genetics , 29 (11) pp. 609-610. (2013)

مصطلحات موضوعية: Open World assumption, community assessment, computational methods, gene ontology, protein databases, protein function prediction

وصف الملف: application/pdf

Relation: https://discovery.ucl.ac.uk/id/eprint/1411455/2/Dessimoz2013-CAFA%20and%20the%20Open%20World%20of%20protein%20function%20predictions.pdf; https://discovery.ucl.ac.uk/id/eprint/1411455/

الاتاحة: https://discovery.ucl.ac.uk/id/eprint/1411455/2/Dessimoz2013-CAFA%20and%20the%20Open%20World%20of%20protein%20function%20predictions.pdf
https://discovery.ucl.ac.uk/id/eprint/1411455/

المؤلفون: Dessimoz, Christophe, Gabaldon, Toni, Roos, David, Sonnhammer, Erik, L L, Herrero, Javier, Valencia, Alfonso, Altenhoff, A., Apweiler, Rolf, Ashburner, M., Blake, J., Boeckmann, B., Bridge, A., Bruford, E., Cherry, M., Conte, M., Dannie, D., Datta, R., Domelevo Entfellner, B., Ebersberger, I., Galperin, M., Joseph, J., Koestler, T., Kriventseva, E., Lecompte, O., Leunissen, J., Lewis, S., Linard, Benjamin, Livstone, M., Lu, H.-C., Martin, M., Mazumder, R., Messina, D., Miele, V., Muffato, M., Perrière, G., Punta, M., Rouard, M., Schmitt, T., Schreiber, F., Silva, A., Sjolander, K., Skunca, N., Stanley, E., Szklarczyk, R., Thomas, P., Uchiyama, I., van Bel, M., Vandepoele, K., Vilella, A., Yates, A., Zdobnov, E.

المساهمون: Department of Computer Science, Centre for Genomic Regulation - Centre de Regulació Genòmica Barcelona (CRG), Universitat Pompeu Fabra Barcelona (UPF)-Centro Nacional de Analisis Genomico Barcelona (CNAG), Spanish National Cancer Research Center (CNIO), European Bioinformatics Institute Hinxton (EMBL-EBI), EMBL Heidelberg, Centre for Ecology and Hydrology Banchory, Natural Environment Research Council (NERC), Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Université de Strasbourg (UNISTRA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Département de pharmacochimie moléculaire (DPM), Université Joseph Fourier - Grenoble 1 (UJF)-Institut de Chimie - CNRS Chimie (INC-CNRS)-Centre National de la Recherche Scientifique (CNRS), Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 (LBBE), Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS), Régulation de l'expression génétique (REG), Département de Biologie - ENS-PSL (IBENS), École normale supérieure - Paris (ENS-PSL), Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-École normale supérieure - Paris (ENS-PSL), Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS), Bioinformatique, phylogénie et génomique évolutive LBBE (BPGE), Département PEGASE LBBE (PEGASE), Université de Lyon-Université de Lyon-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS)-Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 (LBBE), Institut Pluridisciplinaire Hubert Curien (IPHC), Université de Strasbourg (UNISTRA)-Université de Haute-Alsace (UHA) Mulhouse - Colmar (Université de Haute-Alsace (UHA))-Institut National de Physique Nucléaire et de Physique des Particules du CNRS (IN2P3)-Centre National de la Recherche Scientifique (CNRS), Agence Universitaire de la Francophonie (AUF)

المصدر: ISSN: 1367-4803.

مصطلحات موضوعية: [SDE.BE]Environmental Sciences/Biodiversity and Ecology, [SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics, Phylogenetics and taxonomy, [SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN], [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]

الاتاحة: https://hal.science/hal-01636872
https://hal.science/hal-01636872v1/document
https://hal.science/hal-01636872v1/file/Toward_community_standards_in_the_quest_for_orthologs.pdf
https://doi.org/10.1093/bioinformatics/bts050

المؤلفون: du Plessis, L., Skunca, N., Dessimoz, C.

المصدر: Briefings in Bioinformatics ; volume 12, issue 6, page 723-735 ; ISSN 1467-5463 1477-4054

الاتاحة: https://doi.org/10.1093/bib/bbr002
http://academic.oup.com/bib/article-pdf/12/6/723/592473/bbr002.pdf

المؤلفون: Zucko, J., Skunca, N., Curk, T., Zupan, B., Long, P.F., Cullum, J., Kessin, R.H., Hranueli, D.

مصطلحات موضوعية: SEQUENCE ANALYSIS

وصف الملف: text/html

Relation: http://bioinformatics.oxfordjournals.org/cgi/content/short/23/19/2543; http://dx.doi.org/10.1093/bioinformatics/btm381

الاتاحة: http://bioinformatics.oxfordjournals.org/cgi/content/short/23/19/2543
https://doi.org/10.1093/bioinformatics/btm381

المؤلفون: Gaudet, P., Škunca, N., Hu, J.C., Dessimoz, C.

المصدر: Methods in molecular biology, vol. 1446, pp. 25-37

مصطلحات موضوعية: Animals, Computational Biology/methods, DNA/genetics, Databases, Genetic, Gene Ontology, Humans, Internet, Proteins/genetics, RNA/genetics, Annotation evidence, Annotations, Evidence codes, Function, GO files, Gene Ontology structure, Gene association file (GAF), Vocabulary

وصف الملف: application/pdf

Relation: info:eu-repo/semantics/altIdentifier/pmid/27812933; info:eu-repo/semantics/altIdentifier/eissn/1940-6029; info:eu-repo/semantics/altIdentifier/urn/urn:nbn:ch:serval-BIB_E02D84F1D7CD4; https://serval.unil.ch/notice/serval:BIB_E02D84F1D7CD; https://serval.unil.ch/resource/serval:BIB_E02D84F1D7CD.P001/REF.pdf

الاتاحة: https://serval.unil.ch/notice/serval:BIB_E02D84F1D7CD
https://doi.org/10.1007/978-1-4939-3743-1_3
https://serval.unil.ch/resource/serval:BIB_E02D84F1D7CD.P001/REF.pdf
http://nbn-resolving.org/urn/resolver.pl?urn=urn:nbn:ch:serval-BIB_E02D84F1D7CD4

المؤلفون: Bultet LA, Aguilar-Rodriguez J, Ahrens CH, Ahrne EL, Ai N, Aimo L, Akalin A, Aleksiev T, Alocci D, Altenhoff A, Alves I, Ambrosini G, Pedone PA, Angelino P, Anisimova M, Appel R, Argoud-Puy G, Arnold K, Arpat B, Artimo P, Ascencao K, Auchincloss A, Axelsen K, Gerritsen VB, Bairoch A, Bansal P, Baratin D, Barbato A, Barbie V, Barras D, Barreiro M, Barret S, Bastian F, Neto TB, Baudis M, Beaudoing E, Beckmann JS, Bekkar AK, Ben Hamida Cammoun L, Benmohammed S, Bernard M, Bertelli C, Bertoni M, Bienert S, Bignucolo O, Bilbao A, Bilican A, Blank D, Blatter M-C, Blum L, Bocquet J, Boeckmann B, Bolleman JT, Bordoli L, Bosshard L, Bouchet G, Bougueleret L, Boutet E, Bovigny C, Bratulic S, Breuza L, Bridge AJ, Britan A, Brito F, Frazao JB, Bruggmann R, Bucher P, Burdet F, Burger L, Cabello EM, Gomez RMC, Calderon S, Cannarozzi G, Carl S, Casas CC, Catherinet S, Perier RC, Charpilloz C, Chaskar PD, Chen W, Pepe AC, Chopard B, Chu HY, Civic N, Claassen M, Clottu S, Colombo M, Cosandier I, Coudert E, Crespo I, Creus M, Cuche B, Cuendet MA, Cusin I, Daga N, Daina A, Dauvillier JO, David F, Davydov I, De Sa Ricca Manadelo Ferreira M, De Beer T, De Castro E, De Santana C, Delafontaine J, Delorenzi M, Delucinge-Vivier C, Demirel O, Derham R, Dermitzakis EM, Dib L, Diene S, Dilek N, Dilmi J, Domagalski MJ, Dorier J, Dornevil D, Dousse A, Dreos R, Duchen P, Roggli PD, Duperret ID, Durinx C, Duvaud S, Engler R, Erkek S, Lopez PE, Estreicher A, Excoffier L, Fabbretti R, Falcone J-L, Falquet L, Famiglietti ML, Ferreira A-M, Feuermann M, Filliettaz M, Flegel V, Foucal A, Franceschini A, Fucile G, Gaidatzis D, Garcia V, Gasteiger E, Gateau A, Gatti L, Gaudet P, Gaudinat A, Gehant S, Gfeller D, Gharib WH, Ghraichy M, Gidoin C, Gil M, Gleizes A, Gobeill J, Gonnet G, Gos A, Gotz L, Gouy A, Grbic D, Groux R, Gruaz-Gumowski N, Grun D, Gschwind A, Guex N, Gupta S, Getaz M, Haake D, Haas J, Hatzimanikatis V, Heckel G, Gardiol DFH, Hinard V, Hinz U, Homicsko K, Horlacher O, Hosseini S-R, Hotz H-R, Hulo C, Hundsrucker C, Ibberson M, Ilmjarv S, Ioannidis V, Ioannidis P, Iseli C, Ivanek R, Iwaszkiewicz J, Jacquet P, Jacquot M, Jagannathan V, Jan M, Jensen J, Johansson MU, Johner N, Jungo F, Junier T, Kahraman A, Katsantoni M, Keller G, Kerhornou A, Khalid F, Klingbiel D, Komljenovic A, Kriventseva E, Kryuchkova N, Kumar S, Kutalik Z, Kuznetsov D, Kuzyakiv R, Lane L, Lara V, Ledesma L, Leleu M, Lemercier P, Lew D, Lieberherr D, Liechti R, Lisacek F, Lischer H, Litsios G, Liu J, Lombardot T, Mace A, Maffioletti S, Mahi M-A, Maiolo M, Majjigapu SR, Malmstrom L, Mangold V, Marek D, Mariethoz J, Marin R, Martin O, Martin X, Martin-Campos T, Mary C, Masclaux F, Masson P, Meier C, Messina A, Lenoir MM, Meyer X, Michel P-A, Michielin O, Milanese A, Missiaglia E, Perez JM, Caria VM, Moret P, Moretti S, Morgat A, Mottaz A, Mottin L, Mouscaz Y, Mueller M, Murri R, Mylonas R, Neuenschwander S, Nikitin F, Niknejad A, Nouspikel N, Nso LN, Okoniewski M, Omasits U, Paccaud B, Pachkov M, Paesano SG, Pagni M, Palagi PM, Pasche E, Payne JL, Pedruzzi I, Peischl S, Peitsch M, Perlini S, Pilbout S, Podvinec M, Pohlmann R, Polizzi D, Potter D, Poux S, Pozzato M, Pradervand S, Praz V, Pruess M, Pujadas E, Racle J, Raschi M, Ratib O, Rausell A, De Laval VR, Redaschi N, Rempfer C, Ren G, Vahdati RAR, Rib L, Grognuz OR, Altimiras ER, Rivoire C, Robin T, Robinson-Rechavi M, Rodrigues J, Roechert B, Roelli P, Romano V, Rossier G, Roth A, Rougemont J, Roux J, Royo H, Ruch P, Ruinelli M, Sater MRA, Rohrig UF, Rueger S, Salamin N, Sankar M, Sarkar N, Saxenhofer M, Schaeffer M, Schaerli Y, Schaper E, Schmid A, Schmid E, Schmid C, Schmid M, Schmidt S, Schmocker D, Schneider M, Schuepbach T, Schwede T, Schutz F, Sengstag T, Serrano M, Sethi A, Shahmirzadi O, Sigrist C, Silvestro D, Neto FAS, Simillion C, Simonovic M, Skunca N, Sluzek K, Soneson C, Sprouffske K, Stadler M, Staehli S, Stevenson B, Stockinger H, Straszewski J, Stricker T, Studer G, Stutz A, Suffiotti M, Sundaram S, Szklarczyk D, Ovenyi PS, Tegenfeldt F, Teixeira D, Tellenbach S, Smith AAT, Tognolli M, Topolsky I, Van Du Tran T, Tsantoulis P, Tzika AC, Agote AU, Van Nimwegen E, Von Mering C, Varadarajan A, Veranneman M, Verbregue L, Veuthey A-L, Vishnyakova D, Vyas R, Wagner A, Walther D, Wan HW, Wang M, Waterhouse R, Waterhouse A, Wicki A, Wigger L, Wirapati P, Witschi U, Wyder S, Wyler K, Wuthrich D, Xenarios I, Yamada K, Yan Z, Yasrebi H, Zahn M, Zangger N, Zdobnov E, Zerzion D, Zoete V, Zoller S, Abriata L, Aebischer T, Akhmedov M, Filho AAM, Andreozzi S, Appel N, Armand F, Arribas A, Asgari S, Ataman M, Audagnotto M, Aydin D, Bady P, Bank C, Barac D, Bargeton B, Barido-Sottani J, Barillari C, Bartha I, Bean A, Becker J, Beerenwinkel N, Bellement G, Benedetti F, Bergmann S, Berneche S, Bevers R, Biasse D, Bichsel M, Bieler J, Piccini APB, Do Amaral MB, Bolliger C, Boskova V, Brown A, Bryois J, Buil A, Cannavo R, Cardner M, Carelli FN, Carmona S, Cascione L, Chakrabarti A, Chaturvedi N, Choobdar S, Clivaz C, Constantinescu S, Corre T, Quezada DCC, Croce R, Cuendet A, Cui J, Dainese R, Dal Peraro M, Dallavilla T, De Oliveira L, Delaleu N, Delaneau O, Deplancke B, Dharmarajan L, Diekmann M, Dimitrakopoulos C, Dimitriades-Schmutz B, Dimitrova Y, Dirmeier S, Dobay MP, Dougoud M, Duc J, Dumont G, Du Plessis L, Dorr D, Elfstroem K, Elmer F-J, Ewing GB, Fanaswala I, Fellay J, Feller C, Fengos G, Ferrer A, Fiaux S, Field C, Finci I, Fofonjka A, Fonti G, Fried P, Frochaux M, Fuentes J, Galbusera L, Galimberti M, Garcia-Albornoz M, Garcia-Escudero R, Garieri M, Georgieva L, Ghiurcuta CG, Ghosh S, Gnann A, Gnuegge R, Golumbeanu M, Gomez H, Goudet JO, Gruber AJ, Gruhl F, Guethe S, Guillot E, Guimaraes J, Gumienny RW, Gunawan R, Gustafson K, Gypas F, Hadadi N, Hameri T, Hammer C, Heer F, Heller DM, Hersch M, Hofmann AL, Howald C, Hutter S, Iber D, Irwin K, Jahn K, Jedlinski D, Jethava V, Jorjani H, Julou T, Kaessmann H, Kalantzi A, Kanitz A, Kapopoulou A, Karamasioti E, Karimaddini Z, Keller I, Kiparissides A, Kohler M, Kousathanas A, Kuipers J, Kupczyk P, Kwee I, Kuhnert D, Lakshmanan LN, Lamparter D, Lang B, Laurent S, Leigh D, Lin Y, Lindsay H, Link V, Linnik J, Liphardt T, Liu Y, Loetscher A, Luomi AO, Lykov K, Machlab D, Magnus C, Maillard-Wermelinger A, Malafeev A, Malaspinas A-S, Parera RM, Manesso E, Manukyan L, Mapelli SN, Marbach D, Lopez MJM, Wynn MM, Martin G, Martins AF, Matthes K, Mazza C, McDaid A, Mermet JO, Michos O, Milinkovitch MC, Misios A, Miskovic L, Mitov V, Mitra A, Mittal N, Montazeri H, Moret B, Naef F, Nair N, Nicolas DL, Nicolet S, Noh H, Nowicka M, Oeyaas O, Omidi S, Ongen H, Ormond L, Ottoz D, Panousis N, Gao NP, Modarres HP, Pecerska J, Vieira JP, Pivkin I, Planet E, Cespedes SP, Pradhan R, Prados J, Racko D, Radigois M-F, Rasmussen D, Riba A, Rinn B, Rivoal M, Robinson M, Rossi S, Rudolf F, Rueedi R, Ruscheweyh H-J, Rybinski M, Rzepiela AJ, Sakoparnig T, San Roman Rincon MM, Savoglidis G, Scepanovic P, Schaad O, Schleiss R, Schmich F, Schmidt R, Schulthess S, Schwalie PC, Seifert D, Seijo M, Shao M, Shim H, Singer J, Sobel J, Soh KC, Flitman RS, Soto S, Sousa V, Stadler T, Stasiak A, Stefani A, Steger Y, Stelling J, Stopka A, Stevant I, Sunnaker M, Syed AP, Tamo G, Tanaka S, Theiler G, Thorball CAW, Thurnherr T, Ccenhua MRT, Tidin O, Tokic M, Riera MT, Tomasini M, Tymoshenko S, Ud-Dean M, Urchueguia A, Quintero NV, Vinckenbosch L, Vinuela A, Vollmer J, Voordijk S, Wang J, Wang Z, Warnefors M, Weber LM, Wegmann D, Whitehead E, Wicky A, Widmer L, Ye M, Yerly F, Yeung J, Yordanov P, Zavolan M, Zehnder T, Zhang C, Zhou X, Zisaki A, Zoller B, Zollinger A

المصدر: Nucleic Acids Research, 2016

Relation: https://eprints.ncl.ac.uk/267510

الاتاحة: https://eprints.ncl.ac.uk/267510

المؤلفون: Altenhoff, A.M., Škunca, N., Glover, N., Train, C.M., Sueki, A., Piližota, I., Gori, K., Tomiczek, B., Müller, S., Redestig, H., Gonnet, G.H., Dessimoz, C.

المصدر: Nucleic acids research, vol. 43, no. Database issue, pp. D240-9

مصطلحات موضوعية: Algorithms, Databases, Protein, Gene Ontology, Genome, Plant, Humans, Internet, Plant Proteins/chemistry, Plant Proteins/genetics, Proteome/chemistry, Proteome/genetics, Sequence Homology, Amino Acid, Synteny, Triticum/genetics

وصف الملف: application/pdf

Relation: info:eu-repo/semantics/altIdentifier/pmid/25399418; info:eu-repo/semantics/altIdentifier/eissn/1362-4962; https://serval.unil.ch/notice/serval:BIB_0E374421DCD4; https://serval.unil.ch/resource/serval:BIB_0E374421DCD4.P001/REF.pdf

الاتاحة: https://serval.unil.ch/notice/serval:BIB_0E374421DCD4
https://doi.org/10.1093/nar/gku1158
https://serval.unil.ch/resource/serval:BIB_0E374421DCD4.P001/REF.pdf

المؤلفون: Skunca, N, Altenhoff, A, Dessimoz, C

المصدر: PLoS Comput Biol , 8 (5) e1002533 - ?. (2012)

مصطلحات موضوعية: Computational Biology, Database Management Systems, Databases, Genetic, Molecular Sequence Annotation, Reproducibility of Results, Vocabulary, Controlled, stat, phil

Relation: http://discovery.ucl.ac.uk/1395190/

الاتاحة: http://discovery.ucl.ac.uk/1395190/

المؤلفون: Zucko, J, Skunca, N, Curk, T, Zupan, B, Long, PF, Cullum, J, Kessin, RH, Hranueli, D

المصدر: Zucko , J , Skunca , N , Curk , T , Zupan , B , Long , PF , Cullum , J , Kessin , RH & Hranueli , D 2007 , ' Polyketide synthase genes and the natural products potential of Dictyostelium discoideum ' , BIOINFORMATICS , vol. 23 , no. 19 , pp. 2543 - 2549 .

الاتاحة: https://kclpure.kcl.ac.uk/portal/en/publications/6955aa87-7211-40ba-9273-85ae3c4efb2e